Protein

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Genbank accession
XDJ01104.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALVSQSIKNLKGGISQQPEILRYPEQGSLQVNGWSSETEGLQKRPPMVFIKSLGGRGYLGEDPYIHLINRDEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRESQNLTNGGTFRDNVDAIINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKEDPPKVDAQAIAEALATLLRTAHPTWTFNVGTGFIHCIAPADTTLDIFETKDGYADQLINPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVKYDKSQKVWKETVGWNISIGLDYATMPWTLVRAADGNFDLGYHDWKDRRAGDEDTNPQPSFVNSTITDVFFFRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFVLSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVPNYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCINSTMYMLMRNAYNVWIAAVDFKKNSTDFPLEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFSKGTVAICESDGKITEYEPTGSSWDSTPDIRISGDISGKDIVIGFLYDFQYVFSRFLIKQEQNDGTTSTEDSGRLQLRRAWVNYQDTGAFTVSVDNGSREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQKVSLSSFNASPVSIIGCGWEGNYMRRANGI
Physico‐chemical
properties
protein length:791 AA
molecular weight: 88850,10800 Da
isoelectric point:5,43178
aromaticity:0,12263
hydropathy:-0,39558

Domains

Domains [InterPro]
IPR058003
TTP
1–791
IPR058003
XDJ01104.1
1 791
Architecture
TTP
TTP 1-791
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ01104.1
1 791
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9933
Central domain 141 345 206 0,1889
C-terminal 346 791 445 0,1926
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-345
C-terminal
346-791

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PMBT70
[NCBI] 		3229741 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ01104.1 [NCBI]
Genbank nucleotide accession
PP926511 [NCBI]
CDS location
range 8169 -> 10544
strand -
CDS
ATGGCTCTCGTATCACAATCAATCAAGAACCTCAAGGGGGGCATTAGCCAACAGCCTGAAATCCTACGGTACCCAGAACAGGGTTCGCTTCAGGTCAACGGTTGGTCCTCCGAGACTGAGGGTCTCCAGAAGCGACCGCCCATGGTGTTCATCAAGTCCTTGGGAGGCCGTGGGTATCTTGGGGAAGACCCTTACATCCACCTCATAAACCGTGACGAATACGAGCAGTATTACGCCGTGTTCACAGGGAACGACGTTCGGGTATTCGACCTGTCCGGCTATGAGTATCAGGTCCGTGGCGACCGCTCTTACGTGACCGTCAATAACCCTAAGGATAACTTGCGGATGGTCACTGTGGCCGACTACACATTCATCGTGAACCGTACCAGACAGGTCCGTGAGAGTCAGAACTTGACCAACGGTGGTACCTTCAGGGATAACGTGGATGCCATCATTAACGTTCGCGGTGGTCAGTACGGTCGAAAGCTCGAAGTGAACATTAACGGCGTGTGGGTTAGCCACCAGCTGCCTCCGGGTGACAACGCTAAGGAGGACCCACCAAAGGTAGACGCACAGGCTATCGCTGAGGCCCTAGCGACTCTTCTCAGAACGGCACACCCTACGTGGACGTTCAACGTGGGAACAGGGTTCATTCATTGCATAGCTCCGGCAGACACCACACTTGACATATTCGAGACAAAGGATGGGTATGCGGACCAGCTAATCAATCCGGTCACCCATTACGTCCAGAGCTTCTCTAAGTTGCCTCTGAACGCGCCAGATGGGTACATGGTGAAGATTGTCGGAGATACGTCAAAGACCGCCGACCAGTATTACGTTAAGTACGACAAGAGTCAGAAGGTCTGGAAGGAAACTGTTGGATGGAACATCTCGATAGGGCTGGATTACGCCACTATGCCTTGGACACTGGTTCGTGCGGCTGACGGTAACTTTGACCTCGGGTATCACGATTGGAAGGACCGACGTGCGGGTGACGAGGATACCAACCCTCAACCGTCATTTGTGAACTCAACGATAACTGACGTGTTCTTCTTCAGGAACCGCTTAGGGTTCATCTCTGGGGAGAACATTGTGATGTCCCGTACCAGTAAATACTTCGAGTTCTACCCGCCGTCAGTAGCCAACTACACGGACGATGACCCACTGGATGTTGCCGTGAGTCATAACCGAGTGTCTGTCCTGAAGTACGCTGTGAGCTTCGCTGAGGAGCTTCTACTGTGGTCTGACGAGGCACAGTTCGTCCTGTCGGCCAACGGTGTGTTATCCGCTAAGACCGCACAGCTGGACCTGACCACCCAGTTCGACGTGTCAGACCGCGCTCGTCCTTATGGTATCGGCAGGAACATCTACTATGCGTCTCCTCGCAGCTCCTTTACGTCCATCATGCGCTACTACGCGGTACAGGATGTAAGCTCTGTGAAGAACGCAGAGGACATGACGGCTCACGTACCGAACTACATCCCGAACGGTGTGTATAGCATCAACGGGTCTGGTACGGAGAACTTCGCGTGTGTACTGACCAAGGGCGCTCCCAGCAAGGTGTTCATCTACAAGTTCCTCTACATGGATGAGAACATCCGGCAGCAGTCGTGGTCCCACTGGGACTTCGGGGACGGTGTTGAGGTTATGGCCGCAAACTGTATAAACTCGACGATGTATATGCTGATGCGTAATGCCTACAACGTGTGGATAGCTGCGGTGGACTTTAAGAAGAACTCTACGGACTTTCCATTAGAGCCTTACCGATTCCACGTGGACGCCAAGCGGTCATACCACATCTCAGAGACTGCGTATGACATTGAGACGAACCAGACGGTAGTGAACGTCAAGGACATCTACGGTGCGTCGTTCTCTAAGGGTACCGTGGCAATCTGCGAGAGTGACGGTAAAATCACCGAGTACGAGCCTACGGGTTCCTCTTGGGATTCAACCCCGGACATCCGCATTAGCGGTGACATCTCAGGTAAGGACATTGTCATCGGGTTCCTGTACGACTTCCAGTATGTGTTCAGTCGGTTCCTCATCAAGCAGGAGCAGAACGACGGCACAACGTCCACTGAGGACTCTGGTCGACTACAGCTGCGCAGAGCGTGGGTGAACTATCAGGACACTGGCGCGTTCACTGTGAGCGTCGATAACGGTAGCCGGGAGTTCAACTATCTGGTCAACGCCCGAGTAGGTTCTACTGGTCTACGTCTGGGCCAGAAGGCCACGACCACTGGTCAGTATCGTTTCCCGGTGACAGGTAACGCACTGTATCAGAAGGTGTCCTTGAGTTCCTTCAATGCTTCCCCAGTGTCAATAATTGGGTGCGGCTGGGAGGGTAACTACATGAGACGCGCTAACGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
788a27b20eb549dee1ec6b2516610973b94922326fbba2d8db505812d1089b67
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3008
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S., Brinks,E. and Hille,F. 2020-12-18 — GenBank