Protein

View in Explore
Genbank accession
XUJ69209.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MAQPATINLSTIKRGDTYIADFYFTDTDGTTDISAITIDAQARKELDGTLWFDLKPEVVDAAKGHFRIHMTAEETRQITENPPGSFAGIYDIQFSWNGATEVYTSTIVAGAITISKDVTYPSSLVDNTPTEDTKEPTAQQTVNVFLSLDPGSPNYSDVVTVDELTPNQYAVAASMGLANINAIAEAGDAAAAAKKYRDETKVMHDNVVNLEKSADQSSKLATAQAAAAKKSADDAASVVTGGTATLTPEPGKIPLANSEGEIDYGWLPAGVKIPGEAEYNLMVEANMRAFRASGFLEMGLSRQKDQSVNEGITCYGNSSYWLNQFAIGYTVDGIGNSKTNFPVTVVAGVISRIFSQTDSNVNGLSRVTLPDAPDGTQIMDRTGDCRGSSKTAIDLKTEVDPKYGDVASTVEEANRRAFEGILKNGDFRLGSDSWGERLYDNATAAVSDGVYSITVKAGDSNAGQRISQSIQVKAGVSYLISAEVLADNASSSLRLQLYGYGANPKYSVRPNNIVPGKWTRIETTYRAVEDTTLEVQFQNNSTIDSTCSVREMSAVPDTEEVVVGRHDLAGYEFWLEEITPENPGIHRFGNIQSQAPDINGVPTTESNRADGYFAVYNGHQPQKGKEVNWFTATKEQKQKVLEDDGINLFFIKGKLCQQKVRQRTIPGLGNSPFTDPDSSAASTLDYNADTSGDLVSPRGMKDSTDDYTRTSPYFYGEQATQFKNVYGGVDGVFGAALFSGGQGGLDSDLSVDGKVYFLPVCTVQRLNQGAYHPTWNPNGTKGISTEADAQADHFWYDAEVKDRIHSKLSAFIYASKHPDSGVVGGTNKRGDQYFFHNAVYPGQVQDLRMSARYQDTSRLLEDSLVKAVSGEMRGKEKIPYLFMVTKGAADGRASGTGFYRSSTSSNQLVVYGFDSIGNHIVNDRGDIRVGDKVRVIAPSGEVLIATLSSVVDGNDTDANYQARIEGFIPSGTEFVKSTANSDTSGYYFEFYRELPVEFDDLPWVDVIGTPEHISATFPKGVVGQWIRTLPDGTRQDWYYNKKNRSADHFWIGTDDDGDSWTDQTSLVIDSTTNSYSHAAPATRVGLAFYKAFADFTSPSPSSELCGQIGGVVVTGNNAVSYGNRLAPSLAGVIGKMGSSSVVGELMYSIKGMTSKGGIDSNGKLVYSAALAPDHSPINSQATQNDSDAVKAMYSIAKVDNKLYLQLHGRQLKFDSGSSSDKWGDTVPSSDLKNAYGTIDVVNNYGTKTDLNGQSVMTFCHHSMFPVGWA
Physico‐chemical
properties
protein length:1269 AA
molecular weight: 137219,01440 Da
isoelectric point:4,89022
aromaticity:0,09299
hydropathy:-0,40268

Domains

Domains [InterPro]
DC_1387
STR
65–1269
DC_1387
G3DSA:2.60.120.260
STR
419–549
G3DSA:2.60.120.260
IPR008979
STR
420–535
IPR008979
IPR003305
CBM
421–538
IPR003305
XUJ69209.1
1 1269
Architecture
STR
STR 65-1269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUJ69209.1
1 1269
Domain Start End Length (AA) Confidence
N-terminal 1 567 567 0,7278
Central domain 568 1258 692 0,9797
C-terminal 1259 1269 10 0,1250
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-567
Central
568-1258
C-terminal
1259-1269

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiVP505_23LXQ
[NCBI] 		3423642 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUJ69209.1 [NCBI]
Genbank nucleotide accession
PV625063.1 [NCBI]
CDS location
range 45340 -> 49149
strand -
CDS
ATGGCCCAACCCGCCACTATTAATCTAAGCACCATAAAGCGCGGCGATACCTATATCGCTGATTTCTATTTTACTGATACGGACGGAACCACAGACATCTCTGCTATCACAATTGACGCTCAAGCTCGTAAAGAGTTAGACGGCACATTGTGGTTCGACCTCAAGCCTGAAGTCGTTGATGCTGCTAAAGGTCACTTCCGTATCCACATGACGGCTGAAGAGACCCGTCAAATTACTGAGAATCCCCCAGGTTCTTTCGCAGGCATTTACGATATCCAGTTCAGTTGGAACGGCGCAACAGAAGTTTACACTTCTACTATTGTGGCCGGAGCAATCACCATCTCTAAAGATGTCACCTATCCGTCTTCTTTAGTAGACAACACCCCTACTGAAGACACTAAAGAACCAACAGCCCAACAGACCGTTAACGTCTTCTTGAGCTTAGACCCAGGCAGTCCTAACTATAGTGACGTGGTAACAGTTGACGAATTGACCCCAAACCAATACGCAGTTGCTGCTTCTATGGGCCTAGCGAACATCAATGCTATAGCTGAAGCTGGTGATGCGGCGGCTGCGGCGAAAAAGTACCGCGACGAAACTAAAGTGATGCACGACAATGTCGTCAACTTAGAAAAGTCTGCGGACCAAAGCTCAAAGCTTGCAACGGCTCAAGCGGCGGCAGCTAAGAAGAGTGCAGATGACGCGGCGAGTGTGGTCACTGGTGGTACTGCTACGTTAACACCTGAACCGGGTAAAATCCCACTGGCTAACTCTGAAGGTGAGATTGACTATGGCTGGCTTCCGGCTGGCGTTAAAATCCCTGGCGAAGCCGAATACAACCTTATGGTTGAAGCCAACATGAGAGCGTTTCGCGCTTCCGGCTTCTTAGAGATGGGCCTAAGCCGACAGAAAGATCAGTCTGTTAACGAAGGGATCACTTGTTACGGCAATAGCTCTTACTGGCTTAACCAGTTCGCTATCGGTTACACAGTAGACGGTATCGGAAACTCTAAAACTAACTTCCCGGTTACGGTTGTTGCTGGTGTCATTAGTCGCATATTCTCTCAGACTGACTCCAACGTTAACGGCTTGAGTCGTGTCACGCTTCCTGACGCTCCTGACGGCACACAAATAATGGATCGCACGGGCGACTGTCGTGGAAGTAGCAAGACCGCTATTGATCTGAAGACAGAAGTCGATCCTAAGTACGGTGATGTCGCGTCTACAGTAGAAGAAGCAAACCGTCGAGCGTTTGAGGGTATCCTTAAGAACGGTGACTTCCGTCTAGGATCTGACAGTTGGGGCGAGAGACTGTATGACAACGCGACTGCGGCCGTATCAGACGGTGTCTACTCGATCACGGTTAAAGCAGGCGACTCTAACGCTGGTCAGAGAATCTCTCAATCTATCCAGGTTAAAGCAGGCGTTAGCTACCTTATCTCTGCGGAGGTATTGGCTGACAACGCGTCATCGTCACTTCGTCTACAGCTATACGGGTACGGGGCAAATCCTAAGTATTCTGTAAGACCTAATAACATTGTACCGGGCAAGTGGACTAGGATAGAAACTACGTACCGCGCTGTCGAAGACACTACGTTAGAAGTGCAGTTCCAAAACAACAGCACTATCGATTCGACTTGTAGCGTCAGAGAGATGTCAGCAGTTCCTGACACGGAAGAGGTTGTAGTAGGTCGTCATGACTTGGCTGGTTACGAGTTCTGGCTAGAAGAGATCACGCCAGAAAACCCAGGGATTCACCGCTTCGGTAATATCCAGTCTCAAGCGCCTGACATCAATGGCGTACCTACTACAGAGTCGAATCGAGCAGACGGATATTTTGCTGTCTACAACGGTCACCAGCCTCAAAAAGGTAAAGAAGTTAACTGGTTTACAGCAACCAAAGAACAGAAGCAGAAGGTCCTTGAAGATGACGGCATTAATCTGTTCTTCATCAAAGGTAAACTTTGTCAGCAGAAGGTTCGTCAGCGCACAATACCAGGCTTAGGGAATAGTCCTTTCACTGACCCTGACAGCTCAGCCGCTTCTACTCTTGACTACAACGCGGATACGTCCGGCGATCTTGTAAGTCCTAGAGGCATGAAAGATTCTACCGACGACTACACACGCACCTCTCCTTACTTCTACGGTGAGCAAGCCACTCAGTTCAAAAATGTCTACGGTGGTGTTGATGGTGTATTTGGTGCAGCTCTGTTCTCCGGCGGCCAAGGCGGTTTAGATTCAGATTTGAGCGTAGACGGCAAAGTGTACTTCTTGCCTGTGTGTACCGTACAAAGACTGAATCAAGGCGCTTATCACCCTACTTGGAACCCTAACGGTACTAAAGGAATAAGCACAGAAGCCGACGCTCAAGCCGATCACTTCTGGTACGATGCCGAGGTCAAAGATCGTATTCACAGCAAGCTGTCTGCGTTCATCTATGCCAGCAAACATCCTGACTCTGGCGTAGTTGGTGGAACCAACAAACGAGGTGATCAATACTTCTTCCACAACGCTGTATATCCAGGCCAAGTCCAAGACTTGCGAATGTCTGCACGATACCAAGACACGTCAAGACTCCTAGAAGACAGTTTGGTAAAAGCTGTCAGTGGTGAAATGCGCGGCAAGGAGAAAATCCCTTACTTGTTCATGGTGACTAAAGGTGCCGCAGACGGAAGAGCTAGCGGAACTGGCTTCTACCGATCTTCTACTTCGTCTAATCAGTTGGTTGTGTACGGTTTTGATTCAATAGGCAATCATATAGTTAATGACCGTGGCGACATTAGAGTAGGCGACAAGGTTAGAGTTATCGCACCTAGCGGAGAAGTTCTGATAGCTACCCTCTCTTCTGTAGTAGACGGTAATGATACTGACGCCAACTACCAGGCAAGGATTGAAGGCTTTATCCCTTCAGGCACAGAGTTTGTTAAGTCTACCGCAAACTCAGATACGTCTGGTTACTACTTCGAGTTTTACCGAGAGCTGCCTGTAGAGTTTGACGATTTGCCTTGGGTGGATGTAATTGGAACCCCTGAGCATATTTCAGCTACATTCCCTAAAGGTGTGGTGGGTCAATGGATAAGAACACTTCCTGACGGCACCAGACAGGACTGGTACTACAACAAGAAGAACCGCAGTGCAGATCATTTCTGGATCGGCACAGATGATGATGGAGATTCTTGGACCGATCAAACTTCCCTTGTTATCGATTCAACTACGAACAGCTATTCCCACGCTGCTCCGGCAACTCGCGTCGGTTTGGCGTTCTACAAAGCTTTCGCTGACTTCACGTCCCCTTCGCCTAGCTCTGAACTTTGCGGTCAGATTGGTGGGGTTGTTGTTACAGGTAATAATGCTGTTTCCTACGGTAACAGACTGGCCCCTAGCTTAGCCGGGGTAATAGGGAAGATGGGAAGTTCCTCTGTGGTGGGCGAGCTTATGTACTCTATCAAAGGGATGACATCGAAAGGCGGTATAGACAGTAATGGTAAGCTGGTTTACTCGGCGGCACTGGCACCTGACCATTCGCCTATAAATTCCCAAGCCACTCAGAACGACTCAGATGCAGTTAAAGCTATGTACTCAATAGCCAAAGTAGACAACAAATTGTATCTACAATTGCACGGCAGACAGTTGAAGTTTGATTCTGGTTCGTCTTCGGACAAGTGGGGCGACACAGTACCATCTTCAGACCTTAAGAACGCCTACGGGACCATAGACGTAGTTAACAACTATGGCACTAAGACAGATCTTAACGGACAGTCAGTAATGACATTCTGTCATCATTCAATGTTCCCTGTCGGTTGGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b9071055763e6fbb020a4584cc9d4de4584dea0e8d5a2e1decb7d7123117d473
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2842
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50