Protein

View in Explore
Genbank accession
AUR89966.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSCSDYPTAQTAKTFNLDAITENERVTLEQDRTNPASDGKTKKTMWGIENDAALQRDNIDQLSEAQRDNIDDLAESQRENLESTFTAQFAYKRIGNISLYVGDSLPEVDKLNSYQYPDDSGEWYGPIQSQSFPITIPSDPSTDRGWALVNAVTTSSLGGLTNYQAASVADMIAGKPVGWEQGDPVIVHTVGQVWSINRQWKVKSISNPMTYEDFTSNGEIHADDFSGSLSEALDVVRSGESIVLSARDYDIVGKHRIDTIPFPGGNWSGNEVTNVKIIGAGMPLLSDDESRFISGSGSVIQGALINFADGFECYNLGVDVGDHVVDNLNSGDYMEGFIPCTHKINTAWNDSANEYKNNIHFGNIKTLLKQPTGDVSTHKHSCLLGYVDGGTHGYLECVGGFFGFAYKSRNITALGDVNVRRNTSFSVIFKTDEYTECGDYHGRRIITGRLGDSVRAAPIGFRAHDNTRFKGISFEWTGRNCKGIVESGSFNTRQEDVHIRDIDVDDCDDIAVNIPTVADRWIFGMHSIVNSVYGFFMEDSIRECNIGSGVVQGVSPRSITGYILDGDTKHGQIVAREHSQWGVQNNGATINPSMIDGANNANGNISGNKDITSAVILANGWVSGGNPFRVTVADGRLYIEGEVSGGAGDVIVAGSSVGPSKAISMPVTAYDGSNWITMTCTMSTTGEIRVINAASMSGFISFNAEYYFLV
Physico‐chemical
properties
protein length:710 AA
molecular weight: 77117,39540 Da
isoelectric point:4,73784
aromaticity:0,09014
hydropathy:-0,31028

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR89966.1
1 710
Domain Start End Length (AA) Confidence
N-terminal 1 223 223 0,9929
Central domain 224 595 373 0,9828
C-terminal 596 710 114 0,9643
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-223
Central
224-595
C-terminal
596-710

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.135.O._10N.222.54.B6
[NCBI] 		1881408 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89966.1 [NCBI]
Genbank nucleotide accession
MG592506.1 [NCBI]
CDS location
range 24375 -> 26507
strand +
CDS
ATGAGTTGTAGTGACTACCCAACAGCGCAAACCGCAAAGACATTCAATCTGGATGCTATAACAGAAAATGAGCGTGTAACTTTAGAGCAAGACAGAACCAATCCTGCAAGTGATGGTAAGACAAAAAAAACTATGTGGGGTATCGAGAATGATGCCGCATTGCAGCGTGATAATATCGACCAACTATCAGAAGCTCAGCGTGATAATATCGACGATCTAGCAGAATCTCAGCGCGAGAATCTAGAGTCCACCTTCACGGCTCAGTTTGCATATAAGCGCATTGGTAACATTTCTCTATATGTTGGTGATTCGTTACCTGAAGTTGATAAGCTTAACTCTTACCAATACCCAGATGACTCTGGCGAATGGTATGGACCTATTCAGTCGCAATCGTTCCCGATTACTATCCCTTCTGACCCGTCAACAGATAGAGGGTGGGCTTTGGTTAATGCCGTCACTACTAGCTCCCTCGGAGGCTTAACCAACTATCAGGCCGCTAGTGTTGCGGATATGATTGCGGGCAAGCCTGTTGGGTGGGAGCAGGGCGATCCCGTCATTGTTCACACTGTGGGTCAAGTTTGGAGTATCAATAGGCAGTGGAAGGTTAAATCTATTAGCAACCCAATGACGTATGAAGACTTCACTTCAAATGGTGAAATACATGCTGATGATTTTTCAGGATCACTTAGCGAAGCATTGGATGTTGTAAGATCTGGAGAGTCAATTGTATTGAGCGCGCGCGACTATGATATCGTGGGTAAACATCGAATTGACACAATCCCGTTCCCCGGTGGTAATTGGTCTGGTAATGAAGTTACAAACGTAAAAATAATAGGTGCGGGTATGCCCCTCCTTTCTGATGATGAATCCAGATTTATCAGTGGTAGCGGTAGTGTTATTCAAGGGGCATTAATAAACTTTGCAGACGGTTTTGAGTGTTACAACCTCGGTGTTGACGTTGGCGATCATGTTGTTGATAACCTTAACTCTGGAGATTACATGGAAGGGTTTATTCCTTGCACTCATAAAATAAACACTGCGTGGAATGATTCAGCGAACGAGTATAAAAATAACATTCATTTTGGAAACATTAAAACACTATTAAAGCAACCAACTGGTGATGTTTCTACTCATAAACATTCATGTCTGTTGGGGTATGTTGACGGTGGGACTCACGGTTATTTAGAGTGCGTTGGTGGCTTCTTTGGTTTTGCTTATAAGTCTAGAAACATTACAGCTTTGGGAGATGTTAACGTAAGACGTAACACGTCGTTTTCTGTAATTTTTAAAACTGATGAATACACTGAGTGTGGTGATTATCACGGACGAAGAATTATCACAGGAAGACTTGGTGACTCTGTAAGAGCTGCACCAATCGGCTTTAGAGCGCACGATAATACTAGATTCAAAGGTATTAGTTTTGAATGGACAGGGAGAAACTGCAAGGGAATTGTTGAAAGTGGATCGTTTAATACTCGGCAAGAGGACGTGCACATCAGAGATATAGACGTTGATGATTGTGACGATATTGCTGTAAACATACCTACAGTTGCAGATCGATGGATTTTTGGGATGCACTCTATTGTTAACTCTGTTTACGGATTCTTTATGGAAGATTCGATTAGGGAGTGTAATATTGGCAGTGGAGTGGTTCAAGGTGTAAGTCCGAGAAGTATTACTGGCTACATTTTGGATGGGGATACAAAACACGGACAGATTGTCGCTAGAGAACACAGTCAGTGGGGTGTTCAGAATAACGGGGCAACTATCAACCCATCAATGATTGATGGAGCTAACAACGCGAATGGTAATATATCAGGAAATAAAGACATAACATCCGCAGTAATTCTTGCGAATGGGTGGGTGTCAGGTGGCAACCCGTTTAGGGTAACTGTTGCAGATGGCAGATTATATATTGAAGGCGAGGTGTCGGGAGGTGCAGGTGACGTCATCGTTGCAGGCTCATCAGTTGGTCCCAGCAAGGCAATAAGCATGCCTGTCACCGCATATGATGGTTCCAATTGGATTACAATGACTTGTACCATGTCAACAACTGGTGAGATTCGTGTAATTAATGCAGCTAGCATGAGTGGCTTTATTTCGTTTAACGCAGAATATTATTTCCTTGTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9e9c907e5f4310756abdbcd330d3c20a70f58c20079c9949d22a51b6cedf96d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank