Protein

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Genbank accession
UYE96847.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MANVFGGNSSGTCSTSRQNLSSSRQTSSSGGSASSSPNVFSGGGSSGSCSTGGQILSAPKTTVSSAGQVSSSPNVLKGGGSGVNREIDIRDYYTRRQIDKALASKIDSTSVYTNTEVYNKSEVDEKITALSLSNYATDAELSTAVSALESQVNNNLTSNYYQSSILYTKSQVDSLISGVSVSGDYVSRAPSSITEITISPSSTSLPFSLLVRSSNNTETTEVQRWENTSTDFLAAIYADGKAKFTNYTSIGENVSSGNIALFTNNKRVSGVANPVSPSDAVNKLYMETFITTTLDDVINDVDENYIVDALEY
Physico‐chemical
properties
protein length:312 AA
molecular weight: 32877,33070 Da
isoelectric point:4,62814
aromaticity:0,07051
hydropathy:-0,33173

Domains

Domains [InterPro]
DC_1919
ATT
6–180
DC_1919 DC_0363
UYE96847.1
1 312
Architecture
ATT
ATT
ATT 6-180 | ATT 220-309 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM66
[NCBI] 		2969442 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CC9605
[NCBI] 		110662 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE96847.1 [NCBI]
Genbank nucleotide accession
OP053360 [NCBI]
CDS location
range 62323 -> 63261
strand +
CDS
ATGGCTAATGTATTTGGTGGAAATAGCTCAGGTACCTGTTCTACAAGCAGACAAAATTTGTCCTCTTCTAGACAAACAAGCTCTAGCGGCGGATCAGCAAGTTCTTCTCCTAACGTTTTTAGTGGGGGTGGCAGTTCTGGAAGTTGTTCTACAGGAGGGCAAATATTATCTGCTCCTAAAACAACAGTTTCAAGCGCTGGTCAAGTAAGCTCTTCTCCAAATGTTCTTAAAGGTGGTGGCTCAGGTGTAAATAGAGAGATAGATATTAGAGACTATTATACTAGAAGGCAAATTGACAAAGCTCTTGCCTCTAAAATAGATAGCACAAGTGTCTATACTAATACAGAAGTATACAATAAGTCCGAAGTTGATGAAAAAATCACAGCTTTAAGTTTGAGCAATTATGCCACAGACGCAGAGCTATCAACGGCAGTTTCTGCATTAGAAAGCCAAGTAAATAATAACCTTACGAGCAATTACTATCAAAGTTCTATCTTATACACGAAATCCCAAGTTGATAGTTTAATTTCCGGGGTCTCTGTTTCTGGAGATTATGTTTCTAGAGCTCCTTCTTCTATAACAGAAATAACTATTTCTCCTAGCTCTACTTCTCTACCTTTTAGTTTATTAGTTAGGTCGTCAAATAATACGGAAACAACTGAAGTACAAAGATGGGAAAACACATCAACAGACTTTCTTGCAGCAATTTATGCTGATGGTAAGGCTAAATTTACAAATTACACAAGTATAGGTGAAAATGTAAGTAGTGGAAATATCGCGTTATTTACAAATAATAAAAGAGTTTCTGGTGTGGCAAATCCAGTAAGCCCATCTGATGCTGTAAATAAGCTATATATGGAAACATTTATCACAACAACGTTAGATGACGTTATTAATGACGTTGATGAAAATTACATAGTTGACGCTTTAGAGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b3b886518f1d4d9f79e7411f35b08f534ccefa5106898bc322b9b71dce1edf1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7062
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank