Protein

View in Explore
Genbank accession
QYC51508.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MKQILQSAKDYIASRSKIRTAGLIALELPGSSAQNPIYAYFTDYFRDVTYNGILFRSGKVKTIGNHKQDRNLTIGSLSFTITGNDNDEVMRIVESGVSFLDRQVIIYQAIIDDNGDILPVDPATNGPLVFFKGRVTGGGIQEEIPTNNSPGSSTITWTCSNQFYDFDRVNGRLTDDASHRGLEIIDGQLYPGSGAKRLEYQDDYGFSHSNNTVNILAKYQVKELRYKMKKTKKFFGLSSSYSLKEYYETVTKEVDLDFNLAAKYLPVVYGVQNVAGIPIFADTELHNPNVVYIVYAFCEGEIDGFLDFSFADAPMICYDVADSSSRTCFGSKKLVGDTMQRIATGASTTAPSTHGQEYIYNDGNGEIRIWTYHGKREQNAASVLVNLAAQKGFYLQNLNGKGPEYWDNRFKLLDTAYAVVKITINENRTDIPDITADIQGKKVRVYKADGSVDNSKTSLNGIWQTLDYVTSDIYGAGIDLNEINVSQLVSEAAILDIVDTSYEPSWNTFWRYTGWTSMGQENRQIVQMNTILDGADSVFKNVQGLLDSFQGSINNLSGEYRLTVEKYSENPFRINFLDTLGSIELSDTTGKTKYNSVQASLIDPALGWKTNSIVFYNSVYKAQDKNLDKKMQLSFANITNYYTARGMAERELKKSRYSREVSIELPYTFLGLEVNDPVALTYTRWNWTDKFFLISEVENQRNGKINVTLREYAKDVFINSQQVNDSDGIPDITNNVLPPRDFLYTPTPVGTSVGNIGKNGELSWLPSMTSNVIYYTIHQTDRLLPYVIDQVNVDANSRLKQDIMGQPPGMYVFEIRAVDIYGRRSAPVTMTVELNAAKNLSVVPNFRVTNKPPADATQFVGADIKYAWDPIPEEKLIPGVFYTLELYDSVNNMIRSMELRNGYIYDYLLITNKQDYALFHETKLGINRQIFARIRAEGPNGERSVAWATI
Physico‐chemical
properties
protein length:950 AA
molecular weight: 106928,90350 Da
isoelectric point:5,28611
aromaticity:0,11263
hydropathy:-0,35632

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC51508.1
1 950
Domain Start End Length (AA) Confidence
N-terminal 1 313 313 0,9170
Central domain 314 527 215 0,3341
C-terminal 528 950 422 0,0045
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-313
Central
314-527
C-terminal
528-950

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage KEY
[NCBI] 		2821255 Uroviricota > Caudoviricetes > Demerecviridae > Keyvirus key >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC51508.1 [NCBI]
Genbank nucleotide accession
MZ616364.1 [NCBI]
CDS location
range 15633 -> 18485
strand +
CDS
ATGAAACAAATACTTCAGTCTGCTAAGGATTACATTGCTAGTAGATCAAAAATAAGAACAGCAGGGCTAATTGCCCTAGAACTACCAGGATCTTCAGCACAAAACCCTATCTATGCTTACTTTACTGACTATTTTAGAGATGTGACCTATAACGGTATCTTATTTCGTTCTGGTAAGGTAAAGACAATAGGTAACCATAAACAAGACAGGAACTTAACTATAGGATCGCTGAGCTTTACTATTACCGGTAACGATAATGATGAAGTTATGCGTATAGTAGAATCTGGAGTATCTTTCTTAGATCGTCAAGTTATTATATATCAGGCAATTATTGATGATAACGGTGACATTTTACCTGTTGATCCTGCTACTAATGGACCTTTAGTATTCTTTAAGGGTAGGGTTACTGGTGGTGGTATTCAAGAAGAAATCCCCACTAATAATAGCCCAGGTTCTTCTACTATTACTTGGACTTGTTCAAACCAATTTTATGACTTCGATAGGGTTAACGGTCGTCTTACTGATGATGCGTCTCATCGTGGTCTAGAGATTATTGATGGTCAACTATACCCTGGTTCTGGTGCTAAACGTTTAGAATACCAAGATGACTATGGATTCTCCCATTCTAACAACACTGTTAATATTCTAGCTAAGTATCAAGTTAAAGAACTTAGATATAAAATGAAGAAGACTAAAAAATTCTTTGGTCTGTCTTCTAGTTACAGCTTAAAAGAGTATTATGAAACAGTAACTAAAGAAGTTGATCTGGACTTTAACCTAGCTGCTAAGTATCTACCAGTAGTATATGGTGTACAGAACGTGGCGGGTATACCTATCTTTGCAGACACAGAACTACACAACCCTAACGTTGTTTATATTGTGTACGCATTCTGTGAAGGTGAGATTGATGGATTCCTAGATTTTAGTTTTGCAGACGCACCTATGATCTGTTATGATGTTGCGGATTCTAGCTCAAGAACTTGCTTCGGTAGTAAGAAACTAGTTGGTGATACCATGCAGAGGATTGCAACTGGTGCCTCAACTACAGCTCCATCAACTCATGGTCAGGAATATATCTATAATGACGGTAATGGTGAGATTCGTATCTGGACTTACCATGGTAAGCGTGAGCAAAATGCTGCGAGTGTACTAGTTAACCTAGCTGCACAAAAAGGTTTCTATTTACAGAACTTAAATGGTAAGGGTCCTGAGTATTGGGATAACCGTTTCAAGCTATTAGACACTGCGTACGCAGTAGTTAAGATCACTATTAATGAAAACCGTACTGACATTCCTGATATAACTGCGGATATCCAAGGTAAGAAAGTAAGAGTCTATAAAGCAGATGGTTCAGTAGATAATAGTAAGACTAGTTTAAATGGTATCTGGCAAACTTTGGACTATGTTACTTCAGATATATATGGTGCTGGCATTGATCTTAATGAGATTAACGTTTCTCAGCTAGTATCTGAAGCTGCCATTCTAGATATTGTTGATACATCTTACGAGCCGTCATGGAATACATTCTGGCGATATACTGGCTGGACTAGTATGGGTCAGGAAAATAGACAGATTGTCCAAATGAATACTATTTTGGATGGAGCTGACTCTGTATTTAAGAACGTTCAAGGATTATTAGACTCTTTCCAGGGATCTATTAATAACTTATCCGGAGAATATAGACTAACTGTTGAAAAATATTCTGAGAATCCATTTAGAATTAACTTTCTAGATACATTAGGTAGTATAGAGCTTTCTGACACTACGGGTAAAACTAAATATAACTCAGTCCAGGCATCTTTAATAGACCCTGCTCTAGGTTGGAAAACAAACTCTATCGTATTCTATAACTCAGTATATAAAGCTCAAGATAAAAATCTTGATAAAAAGATGCAGTTATCGTTTGCTAACATCACTAACTATTACACTGCTAGGGGTATGGCTGAAAGAGAGTTAAAGAAATCTCGTTACTCTCGTGAAGTTAGTATAGAATTACCTTATACTTTCTTAGGTTTAGAAGTAAACGATCCTGTAGCTCTTACATATACTCGTTGGAACTGGACGGATAAATTCTTCCTTATATCTGAGGTAGAGAACCAGCGTAATGGTAAAATCAATGTTACTTTAAGAGAGTATGCAAAAGACGTATTTATTAACTCTCAACAAGTTAATGACTCTGACGGTATTCCTGATATTACAAATAACGTGTTGCCCCCTAGGGACTTCTTATATACACCAACTCCTGTGGGAACATCTGTAGGTAATATAGGTAAGAATGGTGAGCTATCATGGTTGCCAAGTATGACTTCTAACGTCATTTATTATACTATACACCAAACAGATAGATTACTTCCGTATGTTATTGATCAAGTAAACGTAGACGCGAATAGCAGGCTTAAACAAGATATTATGGGACAACCTCCCGGAATGTACGTGTTTGAAATTCGAGCTGTCGATATCTACGGTAGACGAAGTGCTCCTGTTACTATGACAGTTGAACTAAACGCTGCTAAGAACTTAAGTGTGGTTCCTAACTTCCGTGTTACTAATAAACCTCCAGCGGATGCAACACAATTTGTGGGGGCAGATATTAAGTATGCATGGGATCCTATTCCAGAAGAGAAGTTAATACCTGGAGTGTTCTATACCCTAGAACTTTACGATTCGGTTAACAATATGATTCGTAGTATGGAATTAAGAAATGGGTACATTTATGATTACTTATTAATAACTAACAAACAGGATTATGCTCTATTCCATGAAACTAAGTTAGGTATAAATAGACAGATTTTTGCTAGAATTAGGGCGGAAGGTCCAAATGGTGAAAGATCTGTAGCATGGGCTACAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
35e90cf50afe908d3e6ca5b871c343f4316b43ba9537e510300a3552d7bac4f5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Broad-host-range lytic Erwinia phage Key with exopolysaccharide degrading activity Zlatohurska,M., Gorb,T., Romaniuk,L., Shenderovska,N., Faidiuk,Y., Zhuminska,G., Hubar,Y., Hubar,O., Kropinski,A.M., Kushkina,A. and Tovkach,F. 2023 — GenBank