Protein

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Genbank accession
CBY99577.1 [GenBank]
Protein name
Phi92_gp148
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKKDVIYTGFELYQPELTEENVIYLSIGAGFLKDKDGNDWYEIQKYLSKNYPDAYFLTLDHNNVVVAATKDVSTYFPAGLTVLVTYNVPDKIEEESNLGSWRYDNGKFISHNGFAIEDANLKMEKELTWATNQISAIQDLEELQGLSEEQKDWLGKVKLYRATLIQINVEDAPNITWPTRPKK
Physico‐chemical
properties
protein length:183 AA
molecular weight: 21052,40620 Da
isoelectric point:4,70737
aromaticity:0,12022
hydropathy:-0,51148

Domains

Domains [InterPro]
DC_0382
STR
1–144
DC_0382
IPR003458
RBD
88–182
IPR003458
CBY99577.1
1 183
Architecture
STR
RBD
STR 1-144 | RBD 145-182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phi92
[NCBI] 		948870 Uroviricota > Caudoviricetes > Stephanstirmvirinae > Justusliebigvirus phi92 >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CBY99577.1 [NCBI]
Genbank nucleotide accession
FR775895.2 [NCBI]
CDS location
range 85961 -> 86512
strand +
CDS
ATGAAAAAAGATGTTATTTACACTGGCTTTGAACTATATCAACCAGAATTGACAGAAGAAAATGTCATCTATCTTTCAATAGGTGCTGGTTTTCTTAAAGATAAAGATGGTAATGATTGGTACGAAATTCAGAAATATTTATCCAAAAATTACCCTGATGCCTATTTCTTAACTCTAGATCACAACAATGTAGTTGTTGCAGCTACGAAAGATGTTTCTACATATTTTCCCGCTGGTCTTACTGTTCTTGTAACATACAATGTTCCAGATAAAATAGAAGAAGAAAGCAACCTAGGGTCGTGGAGATATGACAATGGTAAGTTTATTTCTCATAATGGGTTTGCAATAGAAGATGCCAACCTTAAGATGGAAAAAGAATTAACTTGGGCCACAAATCAAATATCTGCAATTCAAGATTTAGAGGAATTACAAGGTTTATCTGAAGAACAAAAAGATTGGTTAGGAAAAGTTAAACTATATCGTGCAACACTGATTCAAATTAACGTTGAAGATGCACCTAATATAACTTGGCCTACAAGACCTAAGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ff6c58d3e502b3d90d7f41367bc5219e02af5eda0c31237c891212fc695364c3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9236
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Substrate specificity of two bacteriophage-associated endo-N-acetylneuraminidases Kwiatkowski,B., Boschek,B., Thiele,H. and Stirm,S. 1983 6401818 GenBank
Polysialic acid depolymerase Kwiatkowski,B. and Stirm,S. 1987 3298958 GenBank
Phage pierces the host cell membrane with the iron-loaded spike Browning,C., Shneider,M.M., Bowman,V.D., Schwarzer,D. and Leiman,P.G. 2012 22325780 GenBank
A multivalent adsorption apparatus explains the broad host range of phage phi92: a comprehensive genomic and structural analysis Schwarzer,D., Buettner,F.F., Browning,C., Nazarov,S., Rabsch,W., Bethe,A., Oberbeck,A., Bowman,V.D., Stummeyer,K., Muhlenhoff,M., Leiman,P.G. and Gerardy-Schahn,R. 2012 22787233 GenBank