Protein

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Genbank accession
AXH71758.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MGSVVSQSIPNFLNGMSQQTPTQRGINQGEDQVNFQNGLVDGLSKRPPLDFVATLDSSNIYSNKTKFWQIQRDADNQYIVALYNGGIKVFGLDGTEKTVTVASGSGYLTSTNPRENFKLVNIADYTFIANTATTVAADSITSAAKVEEFLIVCKLTNYGREYKVALKHPSMAQELEVVFQLPSGNDASTDSKFRDTNKITDILLYGTSSTHWDSAANGIGFNVRRTDTNASVSTTQGLANYSGFTSYFTFEAYDSVIYGKPTDQNANYTITTSDGSGNTAMYSIRDEIQDFSKLPFYGKEGVIIKITGEEGDTLSDYYVKFSGKSGVWNETIAPATSVGVDNSTMPHALINNNNGTFTFQQLDWTDRKCGDIDTNPNPTFVGKKVNNLTFYKNRFGILSGENLILTENASFFNYFATTSTQVLDTDPIDIAASGTQVNTLKNSVGFNESLLLFSDTAQYKLDSSGESISPTTAILNEVSSFEHDDKVTPVSAGKFAYFAQARTNNTAIREYFADDDTLTNDGMDITVSVGNLIPTNCYQIISNTTEDTLIFLASDTADSQTAPYSGTVSTTYANTMYIYKYFFDGGEKVQNAWSKWEFKGVKIIGAMSLESFIYVLASEGTTTKLLKIDLRNLKDTTIGHGVYLDLKTSVTGTYDAATDLTTFTSPYGAKTGLIAVDRTDGNNYTATNTTGSTYTIVGNHTALYIGVPYESKYTMSTQYVRENTGRGLVAVTSGRYQIRNISFNFENSGFFQVEVTPTNRDTSTAIMNGYVIGTATSVVGQPAIATGTLRVPVQCQNTEFTLDIKSLSHLPVYIAGAEVEGYYHNRARRI
Physico‐chemical
properties
protein length:830 AA
molecular weight: 90757,46380 Da
isoelectric point:4,88295
aromaticity:0,10964
hydropathy:-0,29313

Domains

Domains [InterPro]
IPR058003
TTP
3–830
IPR058003
AXH71758.1
1 830
Architecture
TTP
TTP 3-830
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXH71758.1
1 830
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9581
Central domain 138 357 221 0,5976
C-terminal 358 830 472 0,3609
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-357
C-terminal
358-830

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC022P
[NCBI] 		2283016 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH71758.1 [NCBI]
Genbank nucleotide accession
MH598798 [NCBI]
CDS location
range 21729 -> 24221
strand +
CDS
ATGGGAAGTGTTGTTTCACAATCTATTCCTAACTTCTTAAATGGTATGTCCCAACAGACACCAACACAAAGAGGTATTAATCAAGGAGAAGACCAAGTAAATTTTCAAAATGGTTTAGTAGATGGTCTATCTAAAAGACCTCCTTTAGATTTTGTAGCAACATTAGACAGTAGTAATATTTATTCTAACAAAACAAAATTTTGGCAAATACAAAGAGATGCTGATAATCAATACATTGTAGCTTTATACAATGGCGGTATTAAAGTATTTGGTTTAGATGGTACAGAAAAAACCGTTACTGTAGCAAGTGGGTCAGGTTATTTAACTTCTACAAACCCTAGAGAAAACTTTAAGCTAGTTAACATTGCTGATTATACATTTATTGCTAACACAGCAACAACAGTTGCGGCTGATAGCATAACGTCTGCGGCTAAAGTAGAAGAGTTTTTAATTGTTTGTAAATTAACAAACTACGGTAGAGAATACAAAGTTGCATTGAAACACCCATCAATGGCACAAGAGCTAGAAGTTGTCTTTCAGTTACCTTCAGGTAATGATGCGTCAACCGATAGTAAATTTAGAGATACAAATAAAATAACAGATATACTTTTATATGGTACATCTAGTACACACTGGGACAGTGCGGCTAATGGTATTGGATTTAATGTTAGAAGAACTGACACAAATGCTTCAGTATCAACAACACAAGGATTAGCTAATTATTCAGGTTTCACAAGTTATTTTACTTTTGAAGCATACGACAGTGTAATTTATGGAAAACCGACAGACCAAAATGCTAACTACACTATAACTACATCTGATGGTTCTGGTAACACAGCCATGTATTCTATAAGAGATGAAATACAAGATTTTAGTAAATTACCTTTCTATGGAAAAGAAGGTGTAATTATAAAAATTACTGGAGAAGAAGGAGATACTCTTTCTGATTACTATGTAAAATTTTCAGGTAAGTCTGGTGTATGGAATGAAACTATAGCACCTGCAACTTCTGTAGGAGTAGATAATTCTACAATGCCACACGCATTAATTAATAACAACAATGGTACATTTACATTTCAACAATTAGATTGGACAGATAGAAAATGTGGAGATATTGACACTAACCCTAATCCAACTTTTGTTGGTAAAAAAGTTAACAACTTAACATTTTACAAAAACAGATTTGGTATATTATCAGGAGAGAATTTAATATTAACAGAAAATGCTTCTTTCTTTAATTACTTTGCAACAACATCTACACAAGTATTAGATACTGACCCTATTGATATAGCGGCTTCAGGTACACAAGTTAACACACTTAAAAATTCTGTAGGATTTAATGAAAGTTTATTATTATTTTCTGATACAGCACAATATAAATTAGATAGTTCAGGTGAAAGTATATCACCTACAACAGCTATACTTAATGAAGTATCTTCATTTGAACATGATGATAAAGTAACACCAGTATCAGCAGGTAAGTTTGCATACTTTGCACAAGCAAGAACAAACAATACAGCAATAAGAGAATACTTTGCTGATGATGATACACTTACTAATGATGGTATGGACATTACAGTATCAGTAGGAAACTTAATACCTACTAACTGTTATCAAATTATAAGTAATACAACAGAAGACACACTTATATTTCTAGCGTCAGATACAGCAGACAGTCAAACAGCACCTTATAGTGGCACAGTGTCTACAACATACGCTAACACAATGTATATCTATAAGTATTTCTTTGATGGTGGTGAAAAGGTACAGAACGCATGGTCTAAATGGGAATTTAAAGGTGTTAAGATTATTGGTGCTATGTCATTAGAAAGTTTTATTTATGTATTAGCGTCAGAAGGAACTACTACAAAATTATTAAAAATAGATTTAAGAAATTTAAAAGATACAACAATAGGTCATGGAGTTTATCTTGACCTTAAAACTTCAGTTACAGGAACGTATGATGCGGCAACAGATTTAACTACGTTTACATCACCTTATGGTGCAAAGACTGGGTTGATTGCAGTAGATAGAACTGATGGTAATAACTACACAGCAACAAATACAACAGGTTCAACATATACAATCGTAGGAAACCATACAGCGTTATACATTGGTGTTCCATACGAAAGTAAATACACAATGTCTACACAGTATGTAAGAGAAAATACTGGAAGAGGATTAGTAGCAGTAACTTCAGGTAGATACCAAATACGAAACATATCATTTAACTTTGAAAACAGTGGGTTCTTCCAAGTAGAAGTTACACCTACTAATAGAGATACGTCTACAGCTATTATGAACGGTTATGTTATTGGTACAGCCACGTCAGTGGTAGGACAACCTGCTATAGCAACAGGAACTTTAAGAGTACCTGTACAATGTCAAAACACAGAATTTACTTTAGATATTAAATCGTTATCTCACTTGCCTGTGTATATCGCAGGTGCAGAGGTTGAAGGTTATTATCACAATAGAGCAAGAAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
10b3511892b77593cfc599ac3f7f18c1e55eec93fb6b4516f806b6ebb49493b0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9006
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50