Protein

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Genbank accession
QJD54740.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MNFSFTRDTGDGVKTVFTMSFAGQDEGYISASNIHVYVNGVEVPFTINPADPNKVYLSTAPSNGADVLIRRIMPKNVPYSDFKNGNPFSQDTLNYTQLQQLYVTQELLDGFLPDGFYFKQDVNMGGYNIKNLGEAVDPDDAVKKEVTDNLGNRVSSLEDNLTDTSLTTIPWRFVATGGEVTISPPYTFTNALLYINGVTQTLGADYAYTVSGNQLHLSEPLRYGDEVFVIVGSNLQPPTDIISYDGAMIAYASMVTGVPIQQVYIPVIGLSVNNALVFIENGVIHTLSSPATGTITSISWPDIVIS
Physico‐chemical
properties
protein length:306 AA
molecular weight: 33299,93450 Da
isoelectric point:4,27108
aromaticity:0,10458
hydropathy:-0,02386

Domains

Domains [InterPro]
DC_0041
STR
1–304
DC_0041
IPR005604
ATT
4–110
IPR005604
QJD54740.1
1 306
Architecture
ATT
STR
ATT 1-110 | STR 111-304 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJD54740.1
1 306
Domain Start End Length (AA) Confidence
N-terminal 1 274 274 0,9923
Central domain 275 295 22 0,2922
C-terminal 296 306 10 0,0685
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-274
Central
275-295
C-terminal
296-306

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage MR4
[NCBI] 		2711171 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJD54740.1 [NCBI]
Genbank nucleotide accession
MT104467.1 [NCBI]
CDS location
range 33768 -> 34688
strand +
CDS
ATGAACTTCTCTTTTACTCGTGATACTGGTGATGGAGTTAAGACAGTATTCACAATGTCCTTTGCAGGACAGGATGAGGGCTATATTAGTGCCTCTAATATTCATGTGTATGTCAATGGTGTTGAGGTTCCATTCACCATTAACCCAGCTGACCCAAACAAGGTATATCTATCAACTGCCCCATCTAATGGGGCTGATGTCCTTATCCGGCGAATCATGCCTAAGAACGTTCCTTACTCTGATTTTAAGAATGGAAACCCCTTTAGTCAGGATACTCTGAACTATACCCAGCTACAGCAGTTGTATGTGACACAAGAGCTACTTGATGGATTCCTCCCAGATGGCTTCTACTTTAAGCAAGATGTCAACATGGGCGGTTATAATATCAAGAACTTGGGAGAGGCTGTAGATCCTGATGATGCAGTAAAGAAAGAGGTAACTGATAACTTGGGTAATAGGGTAAGTTCCCTAGAAGATAACCTTACTGATACTTCGTTAACCACAATCCCTTGGCGGTTTGTTGCAACTGGTGGTGAGGTCACAATATCTCCGCCATATACTTTCACTAATGCGCTTCTATACATTAATGGGGTTACACAGACACTTGGTGCAGATTATGCCTATACAGTATCAGGTAATCAGTTACACCTATCTGAGCCACTAAGATATGGGGATGAGGTTTTTGTTATTGTAGGCTCTAACTTACAGCCACCAACTGATATAATCTCCTACGATGGTGCTATGATTGCATATGCAAGCATGGTGACAGGTGTACCTATTCAACAGGTATATATACCAGTTATAGGTCTCTCTGTTAATAACGCACTTGTTTTTATTGAAAATGGTGTTATCCATACCCTTAGCTCTCCAGCTACTGGTACTATCACATCAATATCTTGGCCTGATATTGTTATATCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
fb5500b825d50d2a0b3090c52f9dd22c7f5a61e1ea19cb6da3635e4de67e2977
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7298
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50