Protein

Genbank accession
ACY75910.1 [GenBank]
Protein name
predicted protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MANIKKTFNFRNGVQVDDDNLIVNQTGLVGIGTTVPTEALDVRGKVKVIADPNVTGSGEINATTGIITSLTVTNLTVSGNNYSGGVIGVGISVGTAGIITATEPTGIVTYYGDGKELLNLPTSQWLDKDVGLGYTSIYAQGGVGVGTVDPRFTFQVSGNNDLTNFEEGVGINDKGGIVATGVITATTFKGHVDGSVSSGLSTITQLQSTNANVTGVVTATEFKGDVTGDVVSGVSTITTLQSTTINAGLINATGAGFTGALSGDVTGNVTGNVNGNINAVTGISTLNILKILGTIDGDTVSGILTTGRLTAATSTIGVATAASLNVQGKLGVGINNPIGDIQVYKSGISTVNVVGEEFAVLQLGQRDSIGIGASTAQFKFGETSQELDIINGDPGSINSIIHGGGSAGINTGSFNWIYGVNNSTLMSLDYTGKLGVNKPDPEYPLDVSGIGTFSSDVYVRNSLDVGVLLTVGGNATVAGTLGVTSSVTVGGDLNVTGVFNYPSDVPADKLPDQIDVRINSAGVSTFLGGVNLGAVQVGGLNGVISGVSTIGILTSAENIPLAMGVYSPTAKAVFNRLGVGNTDPINALDVTGTIQATQYLGVGNQPIGAAVDFSNAGRGLTVPSLQNRNFMLPPKVTTTERSNLAGLAAGAIIYNTTTNKLQVYNGSSWQNLH
Physico‐chemical
properties
protein length:673 AA
molecular weight: 68141,29740 Da
isoelectric point:4,52151
aromaticity:0,05349
hydropathy:0,17415

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM2
[NCBI] 		268746 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >
Host Prochlorococcus marinus str. NATL1A
[NCBI] 		167555 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75910.1 [NCBI]
Genbank nucleotide accession
GU071092 [NCBI]
CDS location
range 36294 -> 38315
strand +
CDS
ATGGCTAATATTAAGAAGACATTTAATTTCCGTAATGGTGTTCAGGTTGATGATGATAATCTGATCGTAAACCAAACGGGTCTGGTTGGTATCGGAACTACTGTTCCAACTGAGGCTTTGGATGTCCGAGGAAAAGTTAAAGTTATTGCAGATCCTAATGTTACTGGATCTGGAGAGATTAATGCAACTACAGGTATAATTACATCTTTAACTGTAACCAATTTAACCGTTAGTGGAAATAATTATTCTGGTGGTGTAATTGGTGTTGGTATTAGTGTTGGAACAGCAGGTATTATAACTGCAACAGAACCAACTGGTATTGTTACTTATTATGGTGATGGTAAAGAATTATTGAATCTTCCCACATCACAGTGGTTAGATAAAGACGTAGGATTAGGATATACAAGTATATACGCTCAAGGTGGCGTAGGTGTGGGGACAGTAGATCCTCGATTTACCTTCCAAGTTAGTGGAAATAATGACTTAACTAACTTTGAAGAAGGTGTAGGTATTAATGATAAGGGTGGTATTGTAGCGACAGGTGTTATTACTGCTACTACCTTTAAAGGACATGTTGATGGATCTGTATCTAGTGGATTATCAACCATTACACAGTTACAGTCTACAAATGCAAATGTTACTGGTGTAGTTACTGCTACTGAATTTAAAGGAGATGTTACTGGTGATGTAGTTAGTGGTGTATCAACAATCACTACCTTACAATCAACCACGATAAATGCAGGTCTTATAAACGCTACTGGTGCAGGATTTACTGGTGCTTTATCGGGTGATGTTACTGGTAATGTTACTGGTAATGTTAATGGTAATATTAATGCGGTAACAGGTATTTCAACACTTAATATACTTAAGATACTTGGAACTATTGATGGTGATACTGTTTCTGGTATTCTTACTACTGGAAGATTAACTGCTGCTACTTCAACTATAGGTGTGGCAACAGCAGCATCATTAAATGTTCAAGGTAAATTGGGAGTTGGTATCAATAACCCAATAGGTGATATTCAGGTATATAAGTCAGGAATTTCTACTGTTAATGTTGTTGGTGAAGAGTTTGCTGTTCTACAATTAGGTCAGAGAGATTCGATTGGTATTGGAGCAAGCACAGCACAGTTTAAGTTTGGTGAAACTAGTCAAGAACTTGATATTATTAATGGAGATCCTGGTAGCATCAATAGTATTATTCATGGTGGTGGATCTGCTGGTATTAATACTGGATCATTTAACTGGATATATGGTGTAAATAACAGCACACTAATGTCACTAGACTATACTGGAAAGTTGGGTGTTAATAAACCTGATCCAGAATATCCTTTAGATGTAAGTGGTATTGGAACATTCTCAAGTGATGTTTATGTAAGAAATTCTTTAGATGTTGGTGTTTTACTGACTGTTGGTGGTAATGCAACTGTTGCTGGAACATTAGGAGTTACTAGTAGTGTGACTGTTGGTGGAGATTTAAATGTTACTGGAGTATTTAATTATCCTTCAGACGTTCCTGCTGATAAATTGCCAGATCAAATTGATGTTAGAATAAATTCTGCTGGAGTATCTACATTCTTAGGTGGTGTTAACCTTGGAGCAGTTCAAGTTGGTGGATTAAATGGAGTTATCTCTGGTGTATCCACGATTGGAATCTTAACTTCTGCGGAAAATATTCCATTAGCTATGGGTGTTTATTCACCAACAGCAAAGGCAGTTTTCAATAGACTGGGTGTTGGTAATACTGATCCTATAAATGCGTTGGATGTTACTGGTACTATTCAAGCAACTCAATATCTTGGAGTTGGTAATCAACCAATAGGTGCTGCGGTTGACTTCTCTAATGCTGGTAGGGGACTTACTGTACCATCTTTACAGAATAGAAACTTTATGCTCCCACCAAAAGTTACTACAACTGAGAGAAGTAACTTAGCAGGATTAGCTGCTGGTGCAATAATATACAATACTACTACAAACAAACTTCAAGTTTATAATGGATCTTCGTGGCAGAACCTTCACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
df0ef53a749528cc20cf13267afd33c59bd4d56c548b779daab8ca958722d1ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5419
Evidence 0,5419
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank