Protein

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Genbank accession
AVJ50963.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTTISGTVGRLDGAPEPQAYIVATLAGTGENLAVLAGGPVARQADVRGQIVLPLDIHTETQVHLRLAIPGRTLREATVSLRPGVAYDLAQIFSGAASPTPSPAPVPGMGGVEISGDGDTLTLDGTLYGDIYDTL
Physico‐chemical
properties
protein length:135 AA
molecular weight: 13777,40480 Da
isoelectric point:4,46541
aromaticity:0,03704
hydropathy:0,14519

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Actinomyces phage xhp1
[NCBI] 		2099653 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Actinomyces odontolyticus
[NCBI] 		1660 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Actinomycetales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVJ50963.1 [NCBI]
Genbank nucleotide accession
MG941013.1 [NCBI]
CDS location
range 20033 -> 20440
strand +
CDS
GTGACCACGACTATTTCGGGCACTGTCGGCAGGCTTGACGGCGCTCCCGAGCCGCAGGCCTACATCGTCGCTACGCTCGCGGGGACAGGTGAGAATCTCGCTGTCCTCGCGGGCGGGCCGGTGGCCCGGCAGGCCGACGTGCGAGGGCAGATAGTCCTCCCGCTTGACATCCACACGGAGACGCAGGTGCATCTGCGTCTCGCAATCCCCGGTCGCACCCTCCGCGAAGCGACCGTGTCCCTGCGCCCGGGCGTGGCTTACGACCTGGCGCAGATCTTCTCCGGCGCCGCGTCGCCGACCCCGTCTCCCGCGCCTGTCCCTGGTATGGGCGGCGTCGAGATCTCCGGCGACGGAGACACCCTCACCCTGGACGGAACGCTCTACGGCGATATATACGACACACTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
861ec9b8e8426b0ff0540393c738b549a4621de70d1407f3c1b9485e34bfb0cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6417
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A linear plasmid-like prophage of Actinomyces odontolyticus Promotes Biofilm Assembly Shen,M., Shen,W., Agnello,M., Shi,W., He,X. and Le,S. 2018 29915115 GenBank