Protein

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UniProt accession
O48488 [UniProt]
Protein name
Bacteriophage SPP1 complete nucleotide sequence
RBP type
TSP
Evidence GenBank
Probability 1,00
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNSKKGLSNMGLEILVPHVYPVNLEEWGINKDFQEPEATTEAFNKAFTYAKNMGYFEVWVPPGNFLIDGVNESNVYATENGGGIHLHSNTHYKLNPESVFKINANDAQGYSVFYIGLAYNVTLEGGQLIGDRHEHDYSTVTQNRNTHEFGFGVNVHGSERVNIINVRSRDMTGDNILITNKGNMNYPGQTYIPSKNVTVDNCYLETARRNNLSAVGCDGVLINNCDFIAAGGDVIGPQLGIDFEGYAENGIKYAHPYNLQLKNSRFRDNGRGCFTAHAVGKAIISENFFDDRVSYGFGTDISIVDNHIINDGEVRDLAIDSIQPPSYDNANRVKIAGNKIKGFKKGMTIRGKEIDVTDNDLNNITETGIHVYLAEEITLNENRVNSDCVPLNIQISKKVNVSDNTFKGGAEKYGVIVSGEVEDISFKDNHIEAGGGINAGSAKNVRILSKNEIFVKGKLNALRNNPGSTVKVNGLNIYDPAAYPMELDGSAGTLDIKNVSIYGCKAFIAINIKNGRRHKIKNNDIVFEREKNGGYGVYLSGTERTKLTDNDVSTSNDFAIEAPFHTEGSMYSTIMYNYYDSGVIKNNGTDRVEANDLI
Physico‐chemical
properties
protein length:599 AA
molecular weight: 65970,68180 Da
isoelectric point:5,46805
aromaticity:0,09015
hydropathy:-0,44140

Domains

Domains [InterPro]
IPR012334
STR
40–388
IPR012334 IPR012334
IPR011050
STR
41–385
IPR011050 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR006626
Unmapped
119–158
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 DC_0453
DC_0453
RBD
219–387
DC_0453
IPR011050
STR
353–506
IPR011050
O48488
1 599
Architecture
STR
STR 40-597 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
O48488
1 599
Domain Start End Length (AA) Confidence
N-terminal 1 35 35 0,8571
Central domain 36 588 554 0,9971
C-terminal 589 599 10 0,2713
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-35
Central
36-588
C-terminal
589-599

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPP1
[NCBI] 		10724 Uroviricota > Caudoviricetes > Trautnerviridae > Rivavirus > Rivavirus SPP1
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAA66535.1 [NCBI]
Genbank nucleotide accession
X97918 [NCBI]
CDS location
range 28194 -> 29993
strand +
CDS
GTGACAAATTCTAAAAAGGGGTTGTCTAATATGGGTTTAGAAATTCTTGTTCCGCATGTTTATCCTGTTAACTTGGAAGAATGGGGCATTAACAAAGATTTTCAGGAGCCAGAAGCGACAACCGAGGCATTCAACAAGGCTTTCACGTATGCAAAAAACATGGGTTATTTTGAAGTGTGGGTACCCCCGGGGAACTTCCTGATCGACGGAGTGAACGAATCAAATGTATACGCAACCGAAAACGGAGGCGGCATACACCTTCATTCGAACACGCATTACAAATTGAACCCGGAATCAGTGTTTAAGATCAACGCTAATGACGCTCAGGGCTATTCTGTTTTCTACATCGGACTAGCTTACAACGTCACATTAGAGGGCGGCCAACTCATTGGAGATAGGCACGAACACGATTATTCAACCGTGACACAGAATAGGAATACACACGAATTCGGATTCGGTGTTAATGTGCATGGTAGCGAACGGGTGAATATTATAAACGTCCGTTCCCGGGACATGACAGGCGACAATATTTTAATCACAAACAAAGGTAACATGAACTATCCGGGGCAAACGTATATCCCTTCTAAAAATGTCACTGTAGACAATTGTTATTTAGAAACAGCAAGACGAAATAATCTATCGGCTGTCGGCTGTGATGGCGTCCTCATAAACAACTGCGATTTTATCGCGGCGGGCGGTGATGTAATAGGGCCGCAACTTGGAATTGACTTTGAAGGGTATGCTGAGAACGGCATAAAATACGCCCATCCATACAATCTACAGCTAAAAAACTCGCGGTTTAGAGATAATGGGCGCGGATGCTTCACAGCTCATGCTGTAGGCAAGGCCATTATAAGCGAAAACTTTTTCGATGACCGGGTATCATATGGATTCGGAACAGATATTTCAATCGTGGACAACCATATCATAAATGACGGAGAAGTCAGGGACTTGGCGATTGATTCGATTCAGCCGCCGAGCTATGACAACGCAAACCGGGTTAAAATTGCCGGAAACAAGATCAAAGGGTTTAAAAAAGGCATGACCATAAGAGGTAAAGAGATCGACGTAACGGACAATGATCTTAATAACATAACGGAGACGGGCATACACGTATATCTAGCCGAAGAAATAACGCTCAATGAGAATAGAGTGAATTCAGATTGTGTACCGTTAAACATTCAAATTTCTAAGAAAGTGAACGTGTCAGATAACACATTCAAAGGCGGAGCCGAGAAATACGGGGTTATCGTTTCTGGAGAAGTTGAGGACATTTCTTTCAAAGACAACCATATTGAAGCGGGCGGCGGAATAAATGCCGGGAGCGCTAAAAACGTTAGAATACTCAGCAAAAACGAAATTTTTGTAAAGGGAAAATTGAACGCCTTACGAAACAATCCCGGATCAACAGTTAAAGTGAACGGACTTAATATCTACGACCCAGCGGCTTATCCAATGGAACTGGACGGCTCTGCTGGTACTCTAGACATTAAAAACGTTTCTATATACGGGTGTAAGGCGTTCATTGCAATCAATATAAAAAATGGCAGACGTCACAAAATTAAAAACAATGACATCGTTTTCGAGAGAGAAAAAAACGGCGGGTATGGTGTATATTTATCCGGTACAGAAAGAACTAAACTCACGGATAACGATGTGAGCACATCAAATGATTTTGCAATAGAAGCACCTTTTCACACAGAGGGATCAATGTATAGTACCATCATGTATAATTATTATGATAGCGGCGTCATCAAGAACAACGGAACTGATAGAGTAGAAGCGAACGATTTAATATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
641612441a64da12aaacf1b271733059d98091b47fc08973b1d23c3bc663533f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9036
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50