Protein

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Genbank accession
QGK89677.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MAFQTQSYQKQALGSAGQVSKSFHSFCNTVTGVVADANVCVGCFVQSKTGATDENEVIGASGAAISGKILGVVVKDHYIASANAKAVHIYNLGDNVEILNAGSIFIETESTAKKGQYVFLKTADGSLVFDDKMVKADHTYTGFIVSKGQAEASEGIIEITTSQAYTVDTVATITQ
Physico‐chemical
properties
protein length:175 AA
molecular weight: 18344,36120 Da
isoelectric point:5,25041
aromaticity:0,08000
hydropathy:0,09486

Domains

Domains [InterPro]
IPR054438
STR
3–160
IPR054438
QGK89677.1
1 175
Architecture
STR
STR 3-160 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGK89677.1
1 175
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0199
Central domain 11 164 155 0,0004
C-terminal 165 175 10 0,9972
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-164
C-terminal
165-175

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage DA10
[NCBI] 		2656519 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Campylobacter jejuni subsp. jejuni
[NCBI] 		32022 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGK89677.1 [NCBI]
Genbank nucleotide accession
MN530981 [NCBI]
CDS location
range 13567 -> 14094
strand -
CDS
ATGGCATTTCAAACTCAATCTTATCAAAAACAAGCCTTAGGTAGTGCAGGGCAAGTATCAAAAAGTTTTCATAGTTTTTGCAATACTGTAACTGGAGTTGTAGCTGATGCTAATGTATGCGTTGGTTGCTTCGTTCAATCAAAAACAGGTGCTACTGATGAAAACGAGGTTATAGGTGCAAGTGGTGCTGCAATTAGCGGTAAAATTTTAGGTGTAGTTGTAAAAGACCATTATATAGCAAGTGCTAATGCTAAAGCAGTTCATATTTATAATTTAGGCGATAATGTGGAAATTCTTAACGCTGGTAGTATTTTTATTGAAACAGAAAGCACAGCTAAAAAAGGACAGTATGTATTCTTAAAAACAGCTGATGGTTCTTTGGTTTTTGATGATAAAATGGTTAAAGCTGACCATACTTATACAGGCTTTATTGTTTCAAAAGGTCAAGCGGAAGCTAGTGAAGGAATTATTGAAATTACAACATCGCAAGCTTATACAGTAGATACAGTAGCAACTATTACACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
df9ac3ac008b1fdde4b90953fc7d40a469f98d183250fb946ede54b99e6a7f1f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7283
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Campylobacter bacteriophage DA10 Hooton,S., D'Angelantonio,D., Connerton,P., Aprea,G. and Connerton,I. 2020-06-12 — GenBank