Protein

Genbank accession
CAB4192486.1 [GenBank]
Protein name
Collagen triple helix repeat
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,83
TF
Evidence Phold
Probability 1,00
Protein sequence
MEPLKQTELAQAIKKMRTKSDGRIDRMRSIIKKIQEPQQILKGSQGDSFHWKGEATATTPYRKNDVVHFEGSTYVATDTVVGFSLDSPVWHLMTAKGADGAKGRAGKDGRDGLNGAEGKRGAAGRKGAQGIQGVMGLVWRGQYRLGVSYVVGDVVGLHGSAYVCIGDTEQSPPAGFGWEVLAVQGEQGIRGSMGITGATGATGATGAKGANGVTGDTGQTGATGTAGLGQYAYSASALNYNGTSAIPKYGSPNISANNASGTSTPNTFYFNLIHISTTVTINKILSYCGTGGGSGNVLYGIYSVNGSGYPNTKLYGSSSIPFTGVASTQVSVSGVSTQLVAGWYFLAAIYSDATAAHVYTLSTQVFPAFGQTGAVMTSSSRCMFYDDSAVAYGFALPSSFPTANMYVDKQTVTTLMPALYFEVA
Physico‐chemical
properties
protein length:424 AA
molecular weight: 44073,83610 Da
isoelectric point:8,97621
aromaticity:0,09670
hydropathy:-0,12665

Domains

Domains [InterPro]
IPR050938
96–227
IPR050938
IPR008160
96–136
IPR008160 IPR008160
CAB4192486.1
1 424
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4192486.1 [NCBI]
Genbank nucleotide accession
LR797184 [NCBI]
CDS location
range 25171 -> 26445
strand +
CDS
ATGGAACCTTTAAAGCAAACCGAACTAGCGCAAGCCATTAAAAAAATGCGTACGAAATCCGATGGACGGATTGACCGTATGCGTTCGATCATTAAAAAAATACAAGAGCCTCAACAAATTTTGAAGGGATCTCAAGGCGACTCATTCCATTGGAAGGGCGAAGCCACGGCAACGACTCCGTATCGAAAAAATGATGTCGTGCATTTCGAGGGTTCAACCTATGTGGCGACCGATACCGTCGTTGGTTTTTCGTTGGATTCGCCCGTATGGCATTTGATGACGGCGAAGGGAGCCGACGGGGCAAAGGGACGGGCTGGCAAGGACGGTAGGGACGGTTTGAACGGAGCCGAGGGCAAACGGGGGGCGGCTGGGCGCAAGGGCGCACAGGGCATCCAAGGCGTTATGGGTTTGGTCTGGCGGGGACAATATCGGCTCGGCGTTTCATATGTCGTTGGGGATGTAGTCGGGCTCCATGGGTCGGCGTATGTTTGCATCGGCGACACCGAGCAAAGCCCACCAGCGGGGTTTGGCTGGGAAGTGTTAGCCGTTCAGGGTGAACAGGGCATCCGCGGCTCTATGGGGATCACGGGTGCCACGGGCGCAACTGGTGCAACTGGCGCAAAGGGTGCCAACGGTGTAACTGGCGACACAGGACAGACAGGCGCAACGGGCACCGCTGGGCTCGGTCAATATGCCTATTCGGCTTCAGCATTAAATTACAACGGAACATCGGCAATTCCAAAATATGGAAGCCCAAACATAAGCGCAAATAATGCATCGGGCACAAGTACGCCAAACACATTTTATTTTAATCTCATTCACATTTCTACGACCGTGACGATAAACAAAATTCTTTCGTATTGTGGAACTGGTGGAGGAAGCGGAAATGTGTTGTACGGAATCTATTCTGTAAATGGAAGCGGATACCCAAATACCAAACTTTACGGGAGCAGTTCAATACCATTTACTGGAGTCGCATCGACCCAAGTATCTGTATCTGGAGTCTCTACGCAATTGGTTGCGGGATGGTATTTCCTTGCAGCAATTTATTCCGACGCAACAGCAGCGCATGTTTATACTTTGTCCACGCAAGTTTTTCCTGCATTTGGTCAAACTGGTGCAGTCATGACTTCCTCCAGTCGATGTATGTTCTATGACGATTCGGCGGTTGCGTATGGCTTTGCTTTGCCATCATCATTCCCAACTGCAAATATGTATGTGGACAAACAGACTGTAACAACCCTCATGCCAGCGTTATATTTTGAGGTTGCCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
0b8758663ad3b86d55a0b1fb3652e359513ef0b2cd161972d9bb63fc348fb043
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6865
Evidence 0,6865
Download PDB

Literature

No literature entries available.