Protein

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Genbank accession
XPP60813.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSGPDQKPFKARLGFDANNERLINLADPINQQDGMNLQTFVERNTVPAFDPIRLGYPAGFVVEYDRRLFKAKTQISGSGSFNINNWAEIRAHDKWIFVSGTYVAQPGDCVYVRSSATLPIITLPPTTTEGDVVRVLSDHTADLRTITVVGTIFADVQLVNGSYPITSSSDTTFIWLGGAWRVYHSPVSTYRQLVNGEVLVKNSFNYVDSAVSNKIVQLPAFPLDGQWVAIADANNGGGDYYTTVNAAATDTINGQNSFVLNRFGFQAMFVYNLAQRTWKVVSNIGENRMYKKDFGILPNRQYHVVLTGAVQYMTLPTLLQVGDWVDVIVTIDPSVGDGNPASGLQVDAGTGDIIVMGASTTSQSFAIYNRGITRFVYTQANTWVPIEANDLMTSPPISTGLLTKNAINVVSGTSAGNVYLPKSNSVQAGDFITVRVDIAAGTRVAVNVGEVTTDIINGYGTQNIFPVADDGVMITYIYRGKNGSNQFAWDVFHHGKAYLRKSANLSDLPDVDAARTNLGVLSSTQNDARYHNLVSAPSGGTQIDPNTTTIGDIITSHPNSPTTTASWYITTQWLGSISTSTSAFQVARRGADASDVRVRTRISTDIGGTGSWSDWGVDSAGAFLSQQGGRMYGPINMQTPNGGIIRGDTLPTIPEMRTVYQDCVAIAPFNGPQTGSLIIEFPIVPTANISFQMTVDVLTNVGSGDGSFTATIKGGATPTSISVDNIITDGGNKDFTAKVGVNTNGKFLIVLLSSAGWSSPKISIRNVGIFGAGSNSGAWTTAIWPISIGTPPAVTYTDVAVDKYNVRTYKSNNTLEGSLNVGTDLYIGADSWGKWYRSTGNTGWHNGTHNGGFYMADDTWIQTFSWVDPANPGSGNGNRNLKVNGDMAATGDVTAFYSDRRLKTDLKPIQNALETVKSWNGYTYRANELAGSFGYDTEKPEIGLIAQEVQATTPEAVAQAPFDLTSEKGESLTGENYLTLKYERLVPVLVEAIKEQDKEIQELKSLVSKLLSKFEGSPE
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 109930,50720 Da
isoelectric point:5,21369
aromaticity:0,09519
hydropathy:-0,18018

Domains

Domains [InterPro]
DC_1946
ATT
1–202
DC_1946 DC_1202
DC_1064
ATT
177–330
DC_1064 IPR030392
IPR030392
CHP
898–957
IPR030392 Coil
XPP60813.1
1 1019
Architecture
ATT
STR
ATT 1-330 | STR 503-1016 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPP60813.1
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 616 616 0,5965
Central domain 617 815 200 0,1697
C-terminal 816 1019 203 0,9249
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-616
Central
617-815
C-terminal
816-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Milchi
[NCBI] 		3374953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPP60813.1 [NCBI]
Genbank nucleotide accession
PQ464597 [NCBI]
CDS location
range 145735 -> 148794
strand +
CDS
ATGAGCGGACCAGATCAAAAACCGTTTAAAGCCAGATTAGGCTTTGACGCAAACAATGAACGACTAATTAACCTAGCCGACCCAATTAACCAACAAGACGGAATGAATCTACAAACTTTCGTCGAACGTAATACTGTGCCCGCTTTTGACCCAATCCGTCTTGGATACCCAGCTGGTTTTGTTGTCGAATATGACAGACGACTATTCAAGGCTAAAACCCAGATCAGTGGTTCAGGTTCATTCAACATCAACAACTGGGCCGAAATCCGTGCACATGATAAGTGGATCTTTGTAAGTGGTACCTATGTCGCCCAACCCGGTGACTGTGTATACGTCAGAAGTTCGGCAACACTACCTATCATTACACTACCACCGACAACAACCGAAGGTGATGTGGTTCGTGTACTGAGTGACCACACAGCGGATCTACGCACTATCACCGTGGTTGGAACTATCTTTGCCGATGTTCAATTGGTAAATGGATCATACCCAATTACATCTTCAAGCGACACAACATTCATTTGGTTGGGTGGTGCGTGGAGAGTATACCACAGCCCAGTTTCGACATATCGTCAGCTGGTGAATGGTGAAGTTTTGGTTAAGAATAGCTTCAACTATGTTGATTCGGCTGTTTCTAACAAAATCGTACAACTCCCAGCTTTCCCATTGGATGGTCAGTGGGTTGCGATTGCTGATGCTAATAATGGTGGTGGAGATTATTACACAACCGTAAATGCTGCGGCAACGGATACCATTAACGGTCAAAACAGTTTTGTACTAAACAGATTTGGCTTCCAAGCTATGTTTGTTTATAATTTGGCACAAAGAACTTGGAAAGTTGTTTCTAACATCGGTGAAAACCGTATGTATAAGAAAGACTTCGGGATTCTACCGAATAGACAATATCACGTTGTTCTAACCGGTGCTGTGCAATACATGACTCTACCTACGTTGCTACAAGTCGGCGACTGGGTTGATGTCATCGTTACTATAGATCCAAGTGTTGGTGATGGTAACCCAGCATCCGGCCTACAGGTTGACGCAGGTACCGGCGATATCATCGTTATGGGGGCATCAACTACCAGTCAAAGCTTTGCGATTTATAACCGTGGTATCACCAGATTTGTATACACACAAGCAAATACATGGGTTCCTATCGAAGCCAATGATTTGATGACATCACCACCTATTTCAACCGGTTTGCTGACGAAAAACGCTATTAACGTTGTATCTGGTACTTCGGCTGGTAATGTATACCTACCGAAATCTAACTCTGTTCAGGCCGGTGACTTCATCACTGTACGTGTTGATATTGCAGCTGGTACTAGAGTAGCGGTTAATGTTGGTGAGGTAACTACTGATATCATCAATGGTTATGGGACTCAGAATATTTTCCCGGTAGCCGATGATGGTGTGATGATTACTTATATCTACCGTGGTAAGAACGGTAGTAACCAATTTGCATGGGATGTATTCCATCACGGTAAAGCTTACCTAAGAAAGTCTGCAAATCTATCAGATCTCCCTGATGTTGATGCAGCGCGTACTAATCTAGGCGTTCTTAGTTCCACCCAAAACGACGCCAGATACCATAATTTGGTATCAGCTCCGTCCGGTGGTACACAGATTGATCCTAACACCACAACGATTGGCGATATTATTACATCGCACCCAAATTCGCCGACAACAACCGCGTCATGGTATATCACAACACAATGGTTAGGGAGTATTTCCACATCCACATCTGCATTCCAAGTTGCTAGACGTGGTGCCGATGCAAGTGATGTCAGAGTTAGAACTAGAATTTCTACCGATATCGGCGGTACCGGGTCGTGGAGTGATTGGGGGGTTGATAGTGCTGGTGCATTCCTATCACAACAAGGTGGTAGAATGTATGGTCCTATCAACATGCAAACACCAAATGGTGGGATTATTCGTGGTGATACACTACCAACAATCCCGGAAATGCGAACTGTCTACCAAGACTGTGTTGCAATCGCACCATTTAATGGACCACAAACCGGTAGCTTGATTATTGAGTTCCCGATTGTTCCAACCGCCAACATTTCATTTCAAATGACTGTTGATGTACTGACTAATGTTGGTTCCGGTGATGGGTCATTTACCGCTACAATTAAAGGTGGTGCTACACCAACATCTATTAGTGTTGATAACATTATTACAGATGGTGGTAATAAGGATTTCACTGCAAAAGTTGGTGTTAACACCAACGGTAAATTCTTGATTGTATTGCTAAGCAGTGCTGGATGGTCATCACCTAAGATCAGTATCCGTAATGTTGGTATTTTCGGCGCTGGTTCTAATAGTGGTGCTTGGACTACCGCGATTTGGCCTATCAGTATTGGTACACCACCAGCGGTTACATACACCGATGTAGCAGTGGACAAGTACAACGTAAGAACTTACAAATCCAATAATACATTGGAAGGTAGTTTGAACGTTGGCACCGACCTTTATATTGGTGCTGATAGTTGGGGTAAATGGTACAGATCAACCGGTAATACTGGATGGCATAACGGTACCCACAACGGCGGATTTTACATGGCCGACGATACGTGGATCCAGACATTTAGTTGGGTTGACCCTGCAAATCCGGGTAGTGGAAATGGTAACCGTAACCTGAAAGTTAATGGTGACATGGCCGCAACTGGCGACGTAACAGCTTTCTATTCCGATAGAAGACTGAAAACTGATTTGAAACCAATCCAAAACGCACTGGAAACAGTTAAATCTTGGAACGGTTACACATACAGAGCTAACGAACTTGCCGGATCCTTTGGATACGACACCGAGAAGCCAGAAATTGGTTTGATCGCTCAAGAAGTTCAAGCAACTACGCCAGAAGCTGTTGCACAGGCACCATTTGATTTGACTTCGGAGAAAGGGGAATCACTAACAGGTGAAAACTACTTGACCCTGAAATATGAAAGATTGGTCCCTGTACTGGTAGAAGCTATCAAGGAACAGGATAAAGAAATTCAAGAGCTAAAATCCTTGGTTTCCAAACTGCTATCCAAGTTTGAGGGAAGCCCAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6cbcb2993de0b47cb380dd23d90a21d2997a82febc595d0dec4cebb8c27e57dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6640
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50