Protein

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Genbank accession
WAX24421.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTVYIPGLTETDLKKVILSLQQLGAGRSNAVGTVTLVPSVASTTVSDQNCASGSTVLFTPTTGSAATEIGNGTMYLSAVANKSFTVTHANNATADRTFKYAILG
Physico‐chemical
properties
protein length:104 AA
molecular weight: 10658,92470 Da
isoelectric point:7,89256
aromaticity:0,05769
hydropathy:0,20673

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage ppBeUSDA76-2
[NCBI] 		3003364 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bradyrhizobium elkanii USDA 76
[NCBI] 		398525 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Nitrobacteraceae > Bradyrhizobium > Bradyrhizobium elkanii USDA 76

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX24421.1 [NCBI]
Genbank nucleotide accession
OP596614.1 [NCBI]
CDS location
range 28713 -> 29027
strand +
CDS
GTGACTGTCTATATTCCCGGTCTTACAGAAACCGACCTTAAGAAGGTCATTCTCTCGCTGCAGCAGCTTGGCGCGGGGCGGTCAAACGCAGTCGGGACGGTTACGCTCGTGCCGAGTGTCGCCTCGACGACAGTCAGCGATCAGAATTGTGCGAGCGGTTCTACCGTGCTGTTCACGCCGACCACGGGAAGTGCTGCTACTGAAATCGGTAATGGCACGATGTACCTTAGCGCGGTAGCAAATAAATCGTTCACGGTCACACACGCGAACAATGCGACCGCGGATCGAACATTCAAGTATGCCATCCTCGGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b68e48ab61dd0f7d338c2d18cb9aed768e0bdfde478cbd6c499f31300e9d247
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Spontaneously produced lysogenic phages are an important component of the soybean Bradyrhizobium mobilome Joglekar,P., Ferrell,B.D., Jarvis,T., Haramoto,K., Place,N., Dums,J.T., Polson,S.W., Wommack,K.E. and Fuhrmann,J.J. — — GenBank