Protein

View in Explore
Genbank accession
YP_009219993.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,74
Protein sequence
MSIRLTGILVDGLNNPLVNTTVTLIARSNTLLVLGGSEAVFRTDSTGHYNILVNSGHYVVIVGPQGTEPYKAGEIVLYADSADGSLNGYLVNWVEEELTPDIIKQVQDLVASSQEYALQAERAASSANSDATDARNSKAAAASSASSALTYKNDAKASANAAKTSQTSAAGSANTATQAVTTIQGLKSDVEGLKSDTQTIKNSAVTETTKLKDAAAASATQAGNSAAEAGKQATNASTSATAAKKDADRAKTEADRAEAAADNAPEIQPLPDVWIPFNDSLDMITGFSPSYKKIIIGEDEITMPGDKIIKFKRASTATYVNKSGVLTVAEIDEPRFERDGLLIEGQRTNLLLNSTDPSKWNKSSNMILNTTGTDEFGFAFGKFTLKAEMVGQTSAINIVTVAGNKGVDVTGTEKYVTTSCRVQSGTENLRCRIRFENYDGSAYAFLGDAYLNLTDLSIEKTGGAANRITARAVKDEASKWIFFEATIKALDTENMLGSQIQYAPVKGGGTGADDYIYVATPQVEAGSCPSSFIISGTTPTTRASDMVTMPIKNNVSTPPWTCLVEVHRNWSIVPNAAPRIFDTTYHGSGKPFIFAFSGNPDNINYKNVYVDIGDGDGRANRAIITPDYDFICGFRVKENFDVQAVCQSLIGSVAKTNWRYIVESATLRIGGQTTTGERHMFAHIRNLRIWHKALTDRQMKESI
Physico‐chemical
properties
protein length:703 AA
molecular weight: 75323,29290 Da
isoelectric point:5,46640
aromaticity:0,07255
hydropathy:-0,26885

Domains

Domains [InterPro]
IPR013609
ATT
1–134
IPR013609 DC_0353
IPR008969
ATT
5–73
IPR008969 Coil
DC_1669
ATT
6–216
DC_1669
YP_009219993.1
1 703
Architecture
ATT
STR
ATT 1-216 | STR 217-703
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009219993.1
1 703
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,4163
Central domain 527 692 167 0,5246
C-terminal 693 703 10 0,9957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-692
C-terminal
693-703

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage JenP1
[NCBI] 		1610837 Uroviricota > Caudoviricetes > Queuovirinae > Nonagvirus JenP1 >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009219993.1 [NCBI]
Genbank nucleotide accession
NC_029028 [NCBI]
CDS location
range 19841 -> 21952
strand +
CDS
ATGTCGATTCGTTTAACTGGTATTTTAGTTGACGGGTTGAATAATCCGTTAGTCAATACTACTGTCACACTAATTGCAAGAAGTAACACGTTATTAGTGTTAGGTGGAAGCGAAGCTGTATTCCGCACAGATTCAACTGGACATTATAATATACTGGTGAACTCCGGACATTATGTGGTTATCGTTGGCCCACAAGGTACTGAACCATATAAAGCTGGTGAGATTGTCCTTTATGCAGATAGTGCAGACGGTTCGCTTAACGGTTATCTTGTTAATTGGGTGGAAGAAGAGCTTACACCGGATATCATTAAACAGGTACAAGATTTAGTTGCAAGCTCTCAAGAGTACGCGTTACAAGCAGAACGTGCAGCGTCTTCGGCTAACTCTGATGCTACAGATGCGCGTAACAGCAAAGCGGCGGCAGCTTCCTCAGCTTCATCCGCATTGACTTATAAGAATGATGCAAAGGCAAGCGCAAATGCTGCTAAAACATCACAGACTTCCGCTGCTGGTTCTGCTAACACTGCCACTCAGGCGGTGACCACAATACAAGGTCTCAAGTCTGACGTCGAGGGGTTAAAGTCCGACACGCAGACCATTAAAAACAGTGCAGTCACTGAGACTACTAAACTAAAGGATGCGGCTGCTGCGTCTGCTACACAAGCGGGCAATAGCGCCGCAGAAGCTGGTAAGCAGGCCACTAATGCCAGCACGAGCGCGACCGCAGCTAAGAAAGACGCAGACCGTGCAAAGACGGAAGCTGACCGTGCTGAAGCTGCCGCTGACAATGCACCAGAGATCCAGCCACTACCGGATGTCTGGATACCGTTTAATGACTCCTTAGATATGATTACCGGCTTCTCACCTAGCTATAAAAAGATTATAATTGGCGAAGATGAGATTACAATGCCTGGTGACAAAATCATTAAATTTAAGAGAGCATCTACTGCCACCTATGTTAATAAATCAGGTGTATTGACAGTTGCTGAAATTGATGAACCAAGATTTGAAAGAGATGGTTTATTGATTGAAGGACAGAGAACGAATTTACTACTGAATAGTACGGATCCATCAAAGTGGAATAAATCGTCAAATATGATTCTTAACACAACTGGTACTGATGAATTTGGATTCGCTTTTGGTAAATTTACATTAAAAGCCGAGATGGTCGGTCAGACTTCTGCAATAAACATTGTCACAGTGGCTGGAAACAAAGGTGTGGATGTGACTGGTACTGAAAAGTATGTAACTACATCTTGTCGTGTGCAAAGTGGCACAGAGAATCTTCGTTGTCGTATTAGATTCGAGAATTATGATGGTTCGGCATATGCATTTTTGGGTGATGCATACTTAAATTTGACAGATTTATCTATTGAAAAAACAGGTGGAGCAGCAAATCGTATTACTGCAAGAGCCGTGAAAGATGAAGCAAGTAAATGGATTTTCTTTGAGGCAACAATAAAAGCACTTGACACCGAAAATATGCTTGGGAGCCAAATACAATATGCTCCAGTAAAAGGTGGTGGTACAGGTGCAGACGATTATATTTATGTGGCAACTCCTCAAGTTGAGGCGGGGAGCTGTCCTTCATCTTTCATCATTTCAGGAACGACTCCAACAACAAGAGCTAGCGATATGGTTACAATGCCTATCAAAAACAACGTTTCAACCCCACCTTGGACTTGTCTCGTCGAAGTACATAGAAACTGGTCTATTGTACCAAATGCAGCACCGCGAATCTTCGATACGACATACCACGGCTCCGGAAAACCTTTTATATTTGCATTTAGTGGAAATCCGGATAATATAAACTATAAGAACGTATATGTTGACATTGGGGACGGTGATGGTAGAGCTAATCGGGCAATAATAACTCCAGACTACGATTTTATATGCGGATTTAGAGTCAAAGAAAATTTCGACGTGCAGGCGGTCTGCCAATCTCTAATTGGTTCTGTAGCAAAAACAAATTGGAGATATATCGTCGAGAGTGCAACTTTAAGAATCGGAGGTCAGACAACAACAGGGGAGCGACATATGTTTGCACATATACGCAACCTTCGAATTTGGCACAAAGCATTAACTGATCGTCAGATGAAGGAATCCATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
75fb5c0eada3dbf3de2db4b532ad217cc89c8b03f028b0669100924fa2b1d596
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8128
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50