Protein

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Genbank accession
QKE54333.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MNTPNLERYPFDYTGEAETNLVDGELHVVPPGKKDKIFTLMEGPAFSRTIKLRYGNGQYLRPWVDFQPVNLYPEATNAVGEACTGMVMIINESVSGYVYAEYQVVGGKYDHNSRAVEDLLWAAVSDDRPVFWPDILDRPSVFPPTPHHHDIFNDTYGWEARIALVDNWTVQMFEQGTSERVDSVMDAISVVEDYLTARHAHTVELIDGHIDTHNAHATTKEQAGLAKLDNLKKATINQARAGNRIDLRLTVGGATAILTDALEAYSANLMKQGILPVSRWGNLTYLEPGVSGSFEGSGQISTIDQRPAVLEVDGTLVRLRPGSNGTSLGVYYDYALNAFSDAVNLKMIKTNTQYWPAAMGRDWKPYMMRKSTPDVLWGLAYRVADYPAINARYFIALTGNSFDSTKHDVAFVNASYTHSEYGVRGLTERATLTIADDYVYCVDYCPWGTGRKVGFVLLRIPVADIKSKTDVTWEFLKGWTAVGGPYGSMTGDAIYMAPMEVSTNTADKPMIQIDPQMIATLYRSSWGCYVISDSPGILKIAIGGMMHYYTTQRMVTQSIGYRCLVNVTTRTAQWVDSPQPLRCRINNGDLANISMDTNAATQFTQMKMTGHESGPSGDDEHGLMYLDFNSGYYFKSDISNITNTAIYARVGRIVNWTNKSAAWDIVNRNMQQIKAWADAPTFGSEVGNSLMMPIGLNGNQLLFRCTDENNVEKMVRAWCGSAPNYTYNVVNLGSMTGFPPTSQRYQAPVDSVKTRYVQYLNNNQVTHWASILTPWANSAPINVNALGEYDTSTSVTWNQSELQTAAENFARTLDVGPLVTAARCDIAVPQDASLPLIAMVSVRYTSERGQSFRYYITGVNHSGTRTGLVTGYSLKTSGWITSQLRTDDSSGISNNSNKQPGLVMHRVGNKLFCAMGASTLSSVPGGLHGMAMIFKYDLVTGVITQHTNQAAITINPWNGGVGPYPTVLPNYGLVWSDDSVYSGSYGTILAVIPMGATEAVFDAWSYGVKTGRFVVMAQEVEQGWIVYFTEEVPVILNGREGIAPITAIDLTTVKANPANTTFYVYVVENNGAMTYRIVTTEEAPTISKMFIGTIVTTGSAISNIALKKRSRIGIYQISDTNSGSSIPVSTGMPFQVGDWSFDI
Physico‐chemical
properties
protein length:1143 AA
molecular weight: 125821,62640 Da
isoelectric point:5,58019
aromaticity:0,10236
hydropathy:-0,17647

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKE54333.1
1 1143
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,9908
Central domain 271 522 253 0,8158
C-terminal 523 1143 620 0,3668
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-522
C-terminal
523-1143

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalM_SA002
[NCBI] 		2739752 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Heidelberg
[NCBI] 		611 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKE54333.1 [NCBI]
Genbank nucleotide accession
MN445183 [NCBI]
CDS location
range 20968 -> 24399
strand +
CDS
ATGAACACACCAAACTTGGAACGTTACCCGTTTGATTACACGGGTGAGGCCGAGACCAACCTGGTGGATGGTGAACTGCACGTAGTGCCACCCGGTAAGAAAGACAAGATCTTTACGTTGATGGAAGGTCCAGCGTTTAGTCGTACGATTAAGCTGCGCTACGGCAACGGCCAGTACCTGCGTCCGTGGGTTGATTTCCAACCAGTGAACCTATACCCAGAAGCCACCAACGCGGTTGGTGAGGCTTGTACCGGTATGGTCATGATCATTAACGAATCGGTTAGTGGTTACGTGTATGCTGAATACCAGGTGGTGGGTGGTAAGTATGATCACAACAGTCGCGCGGTAGAAGATCTGCTGTGGGCGGCTGTATCCGATGACCGTCCAGTGTTCTGGCCTGATATCCTGGATCGCCCAAGTGTCTTCCCACCAACACCACATCATCACGACATCTTTAACGACACCTACGGCTGGGAAGCACGTATTGCGTTAGTTGATAACTGGACTGTCCAGATGTTCGAACAAGGAACGTCTGAGCGCGTTGACAGCGTGATGGACGCCATTAGCGTTGTTGAGGACTATCTGACCGCTCGTCACGCGCACACCGTTGAGCTGATTGATGGTCACATCGATACGCACAACGCCCACGCCACCACTAAGGAACAGGCTGGTCTGGCGAAACTGGATAACCTGAAGAAAGCAACGATCAACCAGGCGCGCGCAGGTAACCGCATTGACCTGCGTTTAACCGTAGGGGGTGCGACCGCCATCCTGACCGATGCGCTGGAAGCGTATTCTGCTAACTTGATGAAGCAGGGTATATTGCCAGTATCCCGTTGGGGTAACCTGACTTACCTGGAGCCCGGGGTATCCGGGTCGTTCGAAGGCTCTGGTCAGATTAGCACCATCGATCAACGTCCTGCGGTGTTGGAAGTAGACGGTACATTGGTGCGCTTACGTCCTGGTTCTAACGGTACATCACTGGGTGTGTATTACGACTACGCGTTGAATGCGTTCAGCGACGCAGTTAACCTGAAGATGATCAAGACCAACACTCAGTATTGGCCAGCGGCAATGGGGCGTGACTGGAAGCCATACATGATGCGTAAGTCTACTCCAGATGTGTTATGGGGTTTAGCATACCGTGTGGCTGACTACCCCGCCATCAATGCGCGTTACTTTATTGCGTTGACCGGCAACTCATTCGACTCCACCAAACATGACGTGGCTTTCGTAAATGCGTCGTACACCCATAGTGAATATGGCGTGCGAGGACTTACCGAACGGGCGACCTTAACCATTGCGGATGATTACGTTTATTGTGTGGATTATTGCCCGTGGGGGACAGGTCGTAAAGTAGGGTTTGTGCTGTTGCGTATACCAGTTGCTGATATCAAATCAAAGACTGATGTGACGTGGGAGTTCCTGAAAGGCTGGACGGCGGTTGGTGGGCCGTACGGGTCAATGACGGGCGATGCGATCTATATGGCGCCTATGGAGGTCAGCACTAACACCGCCGACAAACCTATGATCCAGATTGATCCACAAATGATAGCGACCCTGTACCGTAGTTCGTGGGGTTGTTATGTGATCTCAGATTCTCCTGGGATTTTGAAGATTGCGATTGGTGGGATGATGCATTATTATACCACTCAGCGCATGGTCACGCAATCCATCGGTTATCGTTGTTTGGTTAACGTAACGACACGCACCGCACAGTGGGTTGACTCGCCCCAGCCGTTACGTTGCCGCATTAACAATGGCGACCTGGCGAACATCAGCATGGACACCAATGCGGCTACTCAGTTCACCCAGATGAAGATGACGGGTCATGAGTCTGGACCAAGCGGTGATGATGAGCATGGTTTGATGTATCTGGACTTTAACTCCGGTTACTATTTCAAATCTGACATCAGTAACATTACCAACACCGCAATCTATGCGCGTGTGGGGCGCATTGTTAACTGGACCAATAAGTCAGCAGCGTGGGACATTGTTAACCGTAACATGCAGCAGATCAAAGCGTGGGCTGATGCTCCGACGTTTGGTTCTGAAGTAGGTAACAGCTTGATGATGCCAATCGGTCTAAATGGTAATCAGTTGTTATTCCGTTGCACCGACGAAAATAACGTTGAGAAGATGGTACGGGCGTGGTGTGGTAGCGCACCGAACTACACGTACAACGTGGTTAACCTTGGGTCTATGACTGGGTTCCCACCAACCTCTCAGCGTTATCAGGCGCCTGTGGACAGTGTAAAGACTCGCTACGTGCAATACCTGAATAACAACCAGGTCACCCACTGGGCCAGTATTTTAACGCCGTGGGCCAATAGTGCGCCGATAAATGTTAACGCGTTGGGTGAATATGATACCAGTACTTCGGTAACTTGGAATCAGAGCGAGTTACAGACGGCAGCTGAAAACTTTGCTCGTACGTTAGACGTTGGTCCGCTCGTCACGGCCGCACGTTGTGATATTGCTGTTCCTCAAGATGCGTCGCTGCCGTTGATTGCAATGGTGTCGGTTCGCTATACCTCAGAACGTGGTCAGAGTTTCCGTTATTACATCACGGGTGTAAACCATAGTGGTACACGCACTGGGTTAGTAACAGGATATTCATTAAAGACCAGTGGCTGGATCACCTCACAGCTGCGTACCGACGACAGCTCCGGTATTAGTAATAACAGTAATAAACAACCCGGTTTGGTCATGCATCGCGTTGGCAATAAGTTATTCTGTGCTATGGGGGCGTCCACTCTGAGTTCGGTGCCTGGTGGTCTGCATGGTATGGCAATGATCTTCAAGTACGACTTGGTAACGGGGGTGATCACTCAGCACACCAACCAAGCCGCCATTACCATTAACCCATGGAATGGTGGCGTTGGTCCGTACCCGACAGTGCTGCCAAATTACGGGTTAGTGTGGTCGGACGACAGTGTGTATTCCGGATCATACGGCACTATTCTGGCGGTGATTCCGATGGGGGCAACTGAGGCGGTCTTCGACGCCTGGTCGTACGGTGTTAAAACGGGTCGTTTCGTTGTCATGGCTCAGGAAGTAGAACAAGGCTGGATCGTGTACTTTACGGAAGAAGTGCCGGTAATCTTAAATGGTCGTGAAGGCATTGCGCCAATCACAGCCATCGATCTGACTACCGTTAAAGCTAACCCTGCCAATACGACGTTCTATGTTTATGTGGTAGAAAACAACGGAGCGATGACTTACCGTATTGTAACCACTGAAGAAGCGCCAACGATTAGCAAGATGTTCATCGGTACGATAGTAACCACAGGTAGCGCGATCAGTAACATTGCGTTGAAGAAGCGGTCACGTATTGGGATCTACCAGATCTCTGATACCAATTCCGGTTCGTCTATTCCGGTTTCTACCGGGATGCCGTTCCAGGTTGGCGACTGGTCATTTGATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d450b68f5e069fe4e81eab6688794e69de3ad812b3fc65934718d7a116b329ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50