Protein

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Genbank accession
YP_009855966.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MADLLKPAFRATSGLDAAGEKVINVAKADFNVLDDGVNVEFFIEENTIQQYDPTRGYKKNFAVIYDNRIWTSTREIPKPAGAFVEQYWKAVRTDPKWVEIVQPTHSLKSGEYVTINSDDRACTLSLPSNPQDGDTIVIKDIGTNAGYLEQKIRATNQYIVRNGAQVQETILTKRNSYNILIYSERLWQMYETANEEKAIRVVPGSPVRILAGDLIARRYPTAGAVQLILPKFANDGDFIRTVDVDGMGSVYHLIISTFDNTSSIGKAGTTSMEFRTSGHGMLIYSAADKLWRVWDADLRTRLRIIRDNVKLLPNESVIVFGENNSNIQTITLDMPTDVAIGDTVKIALNYLRKNQTAVIRVAQGSTDKILTDIKLLQFPKRSEYPPDATWVSVSSLTFNGDISYTPVIEFSYTEDNGIGVWVIAQNVPTVERVDPLNDATRKRLGVIALASQAEANVDRENNPVKEQAITPETLANRVATEARRGIARIATTAQVNQITEFAFQDDLIISPKKLNEKQATETMRGLAEIATQVETDAGTDDARIVTPKKLNDRKATESLTGIAKLVSTVSTAKGSSRAVMGTNVYNKNNNTDIVTPKSLNQLKGEYEDQGLFYSATEAEVISGTVTAGFENVAVTPIELHKKTATEGRIGFSEIATQVETDAGTDDFRFITPKKLNDRKATQTLTGIARIATQTEFDAGTLDNVISTPLKIKTRFNDTARTSVIPASGLVETGTLWDHYTLDIKEASETQRGTLKLATQVLTDAGVDDATAVTPLKLQKKKATESTEGIIQIATQAETVAGTVGNKAVVPVHLKYVVQQEKSWEATPLRRGFVKMTEGPLTWAGDNVKGSIENQETFLKDGYAVSPYEMNLALSHYLPISAKAVDSDKLDGLDSLQFIRRDVDQTINGVMTFKKDVILEAPLLSTSTADFAGTLEANGLTSTNGDFAIVNGTNKWKFTAGLNGTTLVIGDTTNVLTMNTASGNVAVLNNVSAGNNVSAKTSYILNSREVITSNDSNVVIGDSTNGMSLRSKDAGNIIAVDDTPLGSQYRVLTEKNVKEIVDRDFVKKAGDTMGGKLTVEAPVLPEISEAKAMAPLTVDTVGFWMANITTPSVYQQLPGYAIPEFATNDQGNPYVDSYTYKPAPGLMTCSGVSIDNIYRTWTPRPVGVADNENALTQYISIWDVARGVWGEWSRVLTSQLPPTPSEIGAVASSGSAFNNLRIRDWLQIGNVRIEPDQATQTVKFTWIP
Physico‐chemical
properties
protein length:1247 AA
molecular weight: 136248,90860 Da
isoelectric point:5,21648
aromaticity:0,07057
hydropathy:-0,26616

Domains

Domains [InterPro]
DC_1986
ATT
12–170
DC_1986 DC_1209
IPR048391
ATT
1096–1194
IPR048391
YP_009855966.1
1 1247
Architecture
ATT
STR
ATT
STR
ATT 12-170 | STR 342-1095 | ATT 1096-1194 | STR 1195-1240 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009855966.1
1 1247
Domain Start End Length (AA) Confidence
N-terminal 1 933 933 0,9213
Central domain 934 1132 200 0,4126
C-terminal 1133 1247 114 0,1133
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-933
Central
934-1132
C-terminal
1133-1247

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage vB_EclM_CIP9
[NCBI] 		2696340 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kanagawavirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009855966.1 [NCBI]
Genbank nucleotide accession
NC_048849 [NCBI]
CDS location
range 44571 -> 48314
strand +
CDS
ATGGCCGATTTACTGAAACCTGCATTCCGTGCCACATCTGGTCTCGATGCTGCAGGTGAAAAAGTTATCAACGTAGCCAAGGCCGACTTCAATGTACTTGATGACGGCGTGAACGTTGAATTCTTCATTGAAGAAAATACTATCCAACAATATGACCCTACGCGCGGGTATAAGAAAAATTTCGCTGTTATCTATGATAACCGTATCTGGACTTCTACGAGAGAAATTCCAAAGCCTGCAGGAGCTTTCGTAGAACAGTATTGGAAAGCTGTCCGTACCGACCCTAAATGGGTAGAAATCGTCCAGCCAACCCATTCCCTTAAATCAGGTGAATACGTTACTATTAACAGTGATGACCGTGCATGCACGTTATCTTTACCGTCAAATCCACAAGATGGTGATACGATTGTAATTAAAGATATCGGTACTAATGCCGGTTATCTTGAGCAGAAAATTCGTGCTACTAATCAATATATCGTTCGTAATGGCGCTCAGGTTCAAGAAACTATTTTAACTAAACGCAACTCGTATAATATTCTGATTTATTCAGAACGTTTATGGCAGATGTATGAAACTGCAAACGAAGAGAAGGCTATCAGAGTCGTACCTGGTTCTCCTGTTCGTATTCTTGCCGGTGATTTAATTGCTCGTAGATATCCTACTGCAGGCGCAGTTCAATTAATTCTTCCTAAGTTTGCGAACGACGGTGATTTCATCAGGACTGTTGACGTTGATGGAATGGGCTCTGTATACCATTTAATAATTAGCACTTTTGATAATACATCATCAATTGGCAAAGCTGGTACGACCTCCATGGAATTCCGTACTTCAGGCCATGGTATGCTAATTTATTCTGCCGCCGACAAATTATGGCGTGTTTGGGATGCTGATTTGAGAACCCGTCTTCGTATTATCAGAGATAACGTTAAGCTTCTGCCTAACGAATCAGTTATTGTCTTTGGTGAAAATAACAGTAACATCCAGACTATTACTCTTGATATGCCTACGGATGTAGCTATTGGTGATACTGTTAAGATTGCACTGAATTATCTTCGTAAAAACCAGACGGCAGTTATTCGTGTTGCACAAGGTTCTACAGATAAAATTTTAACCGACATTAAGCTGCTTCAATTCCCTAAACGTTCGGAATATCCACCTGATGCAACTTGGGTTTCTGTATCTTCATTGACTTTCAACGGCGATATTAGTTATACTCCGGTAATTGAATTTAGCTATACTGAAGATAATGGTATAGGTGTTTGGGTTATTGCCCAGAACGTTCCGACCGTAGAACGTGTAGACCCATTAAATGATGCGACTCGTAAGCGTCTTGGTGTAATTGCTCTGGCAAGCCAGGCTGAAGCCAATGTTGATAGAGAAAACAACCCTGTTAAAGAACAGGCAATTACCCCTGAAACTTTAGCTAACCGTGTTGCCACTGAAGCACGTCGTGGTATTGCTCGTATCGCTACTACAGCACAAGTAAACCAGATTACTGAATTTGCATTCCAAGACGACCTCATTATTTCTCCTAAGAAATTAAATGAGAAACAAGCAACTGAAACAATGCGTGGTCTTGCTGAAATAGCAACTCAGGTTGAAACTGATGCTGGTACAGATGATGCACGTATCGTTACTCCTAAAAAGCTTAATGATCGTAAAGCAACCGAATCATTGACTGGTATTGCTAAACTTGTTTCTACTGTAAGTACTGCAAAAGGTTCTTCTAGAGCCGTAATGGGAACTAACGTTTATAATAAAAACAACAATACTGATATTGTTACTCCTAAATCTTTGAATCAGTTGAAAGGTGAATATGAAGATCAAGGTCTGTTCTATTCTGCTACTGAAGCTGAGGTTATTTCTGGGACTGTGACTGCAGGATTTGAAAACGTTGCTGTAACGCCTATTGAATTGCATAAGAAAACTGCTACCGAAGGAAGGATTGGTTTCTCTGAAATTGCTACGCAAGTCGAGACCGACGCTGGTACTGATGATTTCCGTTTCATTACTCCTAAAAAGCTTAATGATCGTAAAGCAACACAAACTCTTACTGGTATTGCTCGTATAGCAACTCAAACAGAATTTGATGCCGGTACATTAGATAATGTTATTTCAACTCCGTTGAAAATTAAAACTAGATTTAATGATACTGCTAGAACATCTGTTATCCCGGCCAGTGGTTTAGTAGAAACAGGGACCTTATGGGACCATTATACACTTGATATCAAGGAAGCAAGTGAGACCCAACGTGGTACACTGAAATTAGCAACCCAGGTGTTAACTGACGCTGGTGTAGATGATGCAACTGCTGTAACCCCACTGAAACTTCAGAAGAAAAAAGCGACTGAAAGTACCGAAGGTATTATCCAAATCGCTACTCAGGCAGAAACTGTTGCTGGTACCGTAGGCAATAAAGCTGTAGTTCCTGTTCATCTGAAATATGTGGTCCAGCAAGAAAAATCTTGGGAAGCAACTCCTTTACGTCGTGGCTTTGTTAAAATGACTGAAGGTCCTTTAACTTGGGCTGGTGATAATGTTAAAGGTTCTATTGAAAACCAAGAAACATTCTTGAAAGATGGTTATGCTGTTTCTCCGTACGAAATGAACTTGGCTCTGTCTCATTATCTCCCAATTAGCGCTAAGGCTGTTGATTCGGATAAATTAGACGGCCTGGATTCACTCCAGTTCATTCGTCGTGATGTAGACCAAACCATTAATGGTGTTATGACCTTCAAGAAGGACGTAATCCTGGAAGCCCCTCTGCTCTCTACAAGCACTGCAGATTTTGCTGGTACTTTAGAAGCTAATGGACTAACCTCTACTAATGGTGATTTCGCTATTGTAAACGGAACTAACAAATGGAAATTCACTGCTGGGTTAAATGGAACTACATTAGTAATTGGTGATACGACTAACGTCTTGACCATGAATACGGCCTCTGGAAACGTTGCTGTTCTGAATAACGTTTCTGCTGGTAATAATGTTTCTGCTAAGACTTCTTATATTCTGAATAGCCGTGAAGTTATTACTAGTAACGATTCTAACGTAGTTATTGGCGATTCTACTAATGGTATGTCCTTACGTTCTAAAGATGCTGGTAATATCATTGCAGTTGATGATACTCCATTAGGAAGCCAATATCGTGTCTTGACTGAAAAGAACGTTAAAGAAATTGTTGACCGTGATTTCGTTAAGAAAGCCGGCGATACTATGGGTGGTAAATTAACGGTTGAAGCTCCGGTTCTCCCAGAGATTTCTGAAGCTAAAGCTATGGCTCCATTAACCGTTGATACAGTAGGTTTCTGGATGGCTAATATTACTACTCCATCGGTATACCAACAATTACCAGGTTATGCTATTCCTGAATTTGCTACTAATGACCAAGGTAACCCTTATGTTGATTCCTACACATATAAGCCTGCTCCTGGTCTGATGACTTGTTCTGGTGTTTCAATCGACAATATCTATCGTACTTGGACCCCTCGTCCGGTTGGTGTTGCTGATAACGAAAACGCCCTTACTCAGTACATCAGTATTTGGGACGTTGCTCGTGGTGTATGGGGTGAATGGTCTCGTGTGTTAACTTCTCAGTTACCACCAACTCCATCGGAAATTGGTGCTGTTGCTTCTTCAGGTTCAGCGTTCAACAACTTGAGAATTCGTGATTGGCTGCAAATTGGTAACGTTCGTATAGAGCCAGACCAAGCAACGCAGACCGTTAAATTCACTTGGATTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae392aa8d60e70b14a490ddaa05a2c7878b4b725fdfe095147a54c4a69f49407
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5738
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the Enterobacter Phage vB_EclM_CIP9 Wang,K., Tamayo,M.G., Penner,T.V., Cook,B.W.M., Court,D.A. and Theriault,S.S. 2020 — GenBank