Protein

Genbank accession
YP_010582169.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVLYPVWDGFDLGADTDMNPEADRPGDYPVSQYPVHMLPLNHLIDNLLVRGCLGVGLGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAVIDTNTKDFPANQIYISGACRVNGLRLIGIRPTPSQGITIDAPNSTVSGITGLVDPSRINVANLVDVGLGNIQVNSFGSDSAALQFRIHKLSTTLNSGAVYSHLNGGPGSGSAWAEITAISGSLPDAVSLKINRGDYRAMEIPVAVTVLPDAAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:371 AA
molecular weight: 39091,16770 Da
isoelectric point:4,93052
aromaticity:0,07547
hydropathy:-0,08005

Domains

Domains [InterPro]
IPR011050
1–371
IPR011050
IPR012332
1–371
IPR012332
IPR015331
1–371
IPR015331
YP_010582169.1
1 371
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage St162
[NCBI] 		2024312 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010582169.1 [NCBI]
Genbank nucleotide accession
NC_069146 [NCBI]
CDS location
range 41586 -> 42701
strand +
CDS
ATGGTGGACGCCGATAACCCTAGTGGCGGTAAGGATGGGGTAATTACCTTCGAAAACTTGAGCGGGGATTGGGGTAAAGGAAACTATGTCATTGGCGGGCGTACAAGTTACGGTTCGGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGGGTTATTGGGTTTACCTCATACCGTGCCGGCGAGAGCGGAGTTAAGACATGGCAGGGGACTGTAGGTTCCACAACGTCACGAAATTATAATCTTCAATTCCGCGATTCCGTAGTTTTGTACCCGGTATGGGACGGATTCGATTTAGGCGCAGATACCGACATGAATCCGGAAGCGGATAGGCCTGGGGATTACCCTGTATCCCAGTACCCAGTACATATGCTTCCGTTAAACCATTTGATTGATAACTTGTTGGTTAGAGGGTGTTTAGGGGTTGGCCTCGGCATGGACGGGCAAGGTCTATACGTCTCTAATATAACCGTAGAGGATTGCGCCGGAAGCGGGGCGTATCTGTTGACGCACGAAACAGTATTCACAAACATTGCGGTAATAGACACGAATACTAAAGACTTTCCTGCTAATCAGATTTATATTTCAGGGGCTTGCCGGGTGAATGGGCTGCGATTGATAGGCATCCGTCCTACACCATCACAGGGTATTACTATAGATGCACCTAACTCTACCGTAAGTGGTATCACCGGTTTAGTAGACCCTTCCAGGATTAACGTTGCCAACTTAGTAGATGTAGGGTTAGGTAACATCCAAGTTAATAGCTTTGGTTCAGACTCAGCAGCTTTGCAGTTCCGTATCCATAAGCTGTCTACAACCTTAAATAGTGGTGCTGTATATTCACACCTTAATGGCGGACCGGGTTCTGGTTCAGCATGGGCCGAAATAACAGCTATATCTGGGTCGTTGCCGGATGCGGTGTCCCTAAAAATTAACCGTGGCGATTATCGTGCAATGGAAATACCCGTAGCCGTTACCGTGCTACCCGACGCAGCCGTTAGGGATAATGGCTCCATCTCGCTATACCTAGAAGGTGATAGTCTTAAAGCATTAGTTAAGCGTGCGGACGGGAGCTATACACGATTGACTTTGGCGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
f629d8baf98b1425a8b14c738a0022769d43ead69774d489730113042a577573
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6407
Evidence 0,6407
Download PDB

Literature

Title Authors Date PMID Source
The isolation and characterization of 16 novel Shigella-infecting phages from the environment Doore,S.M., Schrad,J.R., Dover,J.A. and Parent,K.N. 2020-09-29 — GenBank