Protein

Genbank accession
YP_009791943.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,92
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYTEIAMAVGNSPEILARNVKIMISSGFQPYGDVQMLSGTLFGMKMAKGTANNVEDFMVTSDTTIQGLVNRVNRYLAQGWRRFGNAHFEDGAYLSALAKGDFVSDEEGGSGEAGPQGPVGPQGPAGPAGAIGPQGPQGPTGATGPAGSAGAKGDTGPAGPVGPQGPQGETGESGPQGPIGATGAAGPAGPKGDKGDAGPVGPAGLTFRGMYDAATAYVKDDVVTFNNSSWFATAAVTGENPDVSDSWELLAAQGAPGPQGSAGPAGPTGPTGPEGIQGPQGERGLQGEQGPAGPQGLQGVAGAVGPQGPAGPQGERGLQGPTGPQGLQGVAGPASYNVASGVRSGLINQTDTDFIDIPGETTIRFALTGEKNATVPAKGLWVGVSNTGTANIASIRHTAYQIDSLTTVAADKLKNYTAIVTSMPPGAALWNSVFKPGVFGVTSEHYITTSPGATADSKCFKLTIVGIRNSSDTLAGVYAYKVENLSKPLA
Physico‐chemical
properties
protein length:491 AA
molecular weight: 48991,73330 Da
isoelectric point:4,85771
aromaticity:0,06314
hydropathy:-0,25377

Domains

Domains [InterPro]
IPR050149
109–334
IPR050149
IPR008160
145–203
IPR008160 IPR036573 IPR008160
G3DSA:1.20.5.320
181–228
G3DSA:1.20.5.320 G3DSA:1.20.5.320
IPR003610
212–251
IPR003610
YP_009791943.1
1 491
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sd1
[NCBI] 		2024313 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791943.1 [NCBI]
Genbank nucleotide accession
NC_047847.1 [NCBI]
CDS location
range 30737 -> 32212
strand -
CDS
ATGGCTTACACAGAAATTGCTATGGCAGTAGGGAATTCACCTGAAATCTTAGCCAGAAACGTAAAAATCATGATTTCATCAGGATTCCAGCCATATGGCGACGTGCAGATGCTGAGCGGCACCCTCTTTGGCATGAAGATGGCGAAAGGAACAGCAAACAACGTTGAAGACTTCATGGTGACATCCGATACCACAATTCAGGGATTAGTTAACAGGGTTAACAGATATCTAGCCCAGGGCTGGCGCAGGTTTGGCAATGCCCACTTCGAAGATGGTGCTTATCTTTCAGCGCTGGCGAAAGGTGATTTTGTAAGTGATGAAGAAGGAGGCTCAGGTGAAGCAGGCCCGCAAGGTCCGGTTGGTCCACAGGGTCCAGCGGGCCCGGCAGGAGCTATTGGTCCACAGGGTCCTCAAGGCCCAACAGGTGCTACCGGCCCGGCAGGCTCGGCAGGTGCCAAAGGCGACACTGGTCCAGCTGGCCCCGTAGGCCCGCAAGGTCCTCAAGGTGAAACTGGCGAGTCTGGTCCGCAAGGCCCTATCGGTGCAACCGGCGCAGCAGGTCCGGCCGGCCCTAAAGGTGATAAAGGTGATGCGGGTCCAGTTGGTCCGGCAGGCTTAACATTCCGCGGGATGTACGACGCTGCGACAGCTTACGTTAAAGATGATGTCGTTACATTTAACAACTCTAGCTGGTTTGCTACCGCCGCCGTGACCGGAGAAAATCCAGATGTTAGCGATTCCTGGGAGTTACTGGCCGCACAGGGTGCCCCAGGCCCACAGGGTTCCGCTGGTCCAGCAGGCCCAACTGGCCCGACAGGTCCGGAAGGTATTCAAGGCCCACAAGGCGAGAGGGGCCTGCAAGGTGAGCAAGGCCCAGCCGGCCCGCAAGGCTTACAAGGTGTAGCTGGTGCAGTTGGACCACAAGGCCCGGCAGGCCCGCAGGGTGAGCGTGGATTGCAGGGCCCTACGGGACCTCAGGGCTTACAGGGGGTGGCTGGTCCAGCCTCTTATAACGTAGCTTCAGGCGTAAGGTCGGGGTTGATCAATCAGACGGATACTGACTTTATAGATATACCCGGAGAGACAACAATAAGGTTCGCCCTTACCGGAGAGAAGAACGCCACAGTTCCAGCCAAGGGTTTATGGGTTGGTGTTAGTAATACTGGTACAGCAAATATCGCTTCAATAAGGCACACTGCATACCAGATTGACTCACTCACTACAGTTGCAGCTGATAAGTTGAAAAACTACACAGCGATAGTAACAAGCATGCCTCCTGGGGCCGCTCTTTGGAATAGCGTATTCAAGCCAGGCGTTTTTGGAGTCACATCTGAGCATTACATAACCACATCACCAGGAGCTACGGCTGACTCTAAATGCTTCAAGCTTACAATAGTTGGAATAAGGAACTCATCTGATACTTTGGCAGGCGTTTACGCTTATAAGGTGGAAAACCTAAGCAAACCTCTCGCATAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
885a74e0fc5c9f7a670cfd001518fcd696d3ae2c264f8856f5b850ac878b0aea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7260
Evidence 0,7260
Download PDB

Literature

Title Authors Date PMID Source
The isolation and characterization of 16 novel Shigella-infecting phages from the environment Doore,S.M., Schrad,J.R., Dover,J.A. and Parent,K.N. 2020-09-29 — GenBank