Protein

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Genbank accession
XHY53862.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFARMMNYGNIVPVPLQIKKITPTDLDVVVLYTDGQLYARGNNSFGKFGRGNSNAVKSWTLIRENVKDFWVSQGTLLVQDNDLNYFYCGYGDYIGLPTSTTSFLSYNQYIENLYTQSSSTSIKQMYAGTTWFTFLMDNNTIWSTGWSGARQFADGTGSTQQITDGSFVKAVTPNVDIAQILSTNNCVMFFDTQNNLYIGGGTSGISTSTTWTPFNEYTLYKPSTTYTKTLQYTGCSMGSVSALVENPSTGARQFLVGGLASNGAWGNNTTTSSALAVLGSNSTTLPTGTLYSIHTGYPAQSSILVTSTGVYATGLNASSYAGSLGVGSNVTIGRFTICPMPAEISYSMYDKIKIYRGSYRTFLTADMKNIYSTGTYDDGGPSTNRYVLDTPRQL
Physico‐chemical
properties
protein length:396 AA
molecular weight: 43073,62580 Da
isoelectric point:7,53181
aromaticity:0,12626
hydropathy:-0,17980

Domains

Domains [InterPro]
DC_0433
ATT
1–123
DC_0433 DC_0436
IPR009091
STR
11–222
IPR009091
IPR009091
STR
15–274
IPR009091
DC_0433
ATT
115–264
DC_0433
XHY53862.1
1 396
Architecture
ATT
STR
RBD
ATT 1-264 | STR 265-274 | RBD 275-396
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHY53862.1
1 396
Domain Start End Length (AA) Confidence
N-terminal 1 55 55 0,3109
Central domain 56 289 235 0,6121
C-terminal 290 396 106 0,5813
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-55
Central
56-289
C-terminal
290-396

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage JP4
[NCBI] 		3349802 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY53862.1 [NCBI]
Genbank nucleotide accession
PQ330092 [NCBI]
CDS location
range 112802 -> 113992
strand -
CDS
ATGTTACCTTTTGCAAGAATGATGAATTATGGGAATATTGTGCCTGTACCACTACAAATTAAGAAAATAACACCAACTGATTTAGATGTTGTCGTTCTTTATACGGATGGTCAACTATACGCACGTGGAAATAATAGTTTTGGGAAGTTTGGTAGAGGAAATAGTAATGCAGTAAAGTCATGGACCTTAATTAGAGAAAATGTTAAAGATTTCTGGGTGTCACAAGGAACTTTGTTAGTACAAGATAATGACTTAAATTATTTTTATTGTGGATACGGTGATTATATTGGTTTACCAACTAGTACTACATCATTTTTAAGTTATAACCAATATATTGAAAATTTATACACACAAAGTTCAAGTACTTCAATTAAACAGATGTATGCAGGTACTACGTGGTTTACTTTCTTAATGGATAATAATACAATATGGAGTACTGGTTGGAGTGGGGCTAGACAATTCGCTGATGGTACTGGTAGTACTCAACAAATAACAGATGGATCATTTGTAAAAGCTGTCACGCCTAATGTTGATATTGCACAAATACTGTCAACAAATAACTGTGTAATGTTTTTTGATACACAAAATAATTTATATATTGGTGGTGGTACGTCAGGTATAAGTACCAGTACCACATGGACACCATTTAATGAATATACTTTATATAAACCAAGTACAACATACACAAAAACGTTACAATACACTGGATGCTCAATGGGTTCAGTCAGTGCTTTGGTTGAGAATCCAAGTACTGGTGCACGTCAGTTTCTAGTTGGTGGTTTAGCGAGTAATGGTGCATGGGGTAACAATACCACAACCAGTTCGGCACTTGCTGTATTAGGGAGCAATAGTACGACATTACCAACTGGAACTTTGTATTCAATTCATACAGGATACCCAGCACAATCTAGTATACTAGTTACGAGTACAGGTGTATATGCAACTGGTTTAAATGCGAGTAGTTATGCTGGTTCGTTGGGTGTTGGTTCTAATGTTACTATTGGTAGATTTACTATATGTCCAATGCCAGCAGAAATATCATATTCTATGTATGATAAAATAAAAATATATCGCGGTTCGTATCGTACTTTTCTAACTGCGGATATGAAAAATATATATTCAACCGGAACTTATGATGATGGTGGTCCTAGTACAAATAGATATGTTCTGGATACACCTAGACAATTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c555c784b048fb78dfb8f7ea12ed81ac3c120affa5ca4062584e279e1a85238
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8564
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a novel jumbo phage JP4 with potential to control drug-resistant pathogenic Escherichia coli Zhang,K., Wei,X., He,B., Liao,J., Wang,J., Le,S. and Lu,S. 2025-11-25 — GenBank