Protein

View in Explore
Genbank accession
QBX32327.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAGESAFEVFVNGELPKRISTEDNPLEVVAGKIPVSTGAGLATTFKDPTEIEGMKGEDGADGKSAYQLALDAGFIGTEAEWLESLKGEDGAKGDTGLQGNPGEPGPVTNIKGTVTLDDFETNIAPIDSWEFGDAWFVRSSTATVLKVWSAPETGSPDAGQWIDSGDMRGPEGTGLVIRGQWPDNQELPPLAAKGDTYGWKNALYTFMLVAGEEDIFPDNYAYIQIVPMGPEGPKGDTGAKGDKGDRGLKGDTGAPGKDATPFTIKADLASEDDLPLAGDAKPEEAYSVMVDDVRHLFVFSVDENRWMDLGTWQGPKGEPGQDGIIGGDGPKGDKGDKGDKGDPGQDGIDGQDGAPGENLEILGTYPTMADLLAAGATLVIKKAYAVRDVNTLFYVATTPVTSEGDLINLGQFKGEKGDKGDKGDKGDTGAKGDKGDTGDGGKNLVVSGVLPDLAAIQAVPDPQEQEAWVAADNRHLYMFIDGTWVDLGTHTGAKGDKGDKGDKGDTGAKGDTGDKGDKGDQGENFEIIAVVDTVGEVPPATADNKGKAVVVKGGDVYVNISGTQFVSVGPIGQKGDQGDRGASMRIVGEVGSVEALPELVAGETDPADGEAYIVTVIQGDDTIKVIYVANRSTNTYDGPFNIQGPQGNDGPQGEVGPRGEIGQGIKIVGDYPSEAALTAAHPTSAIGDAYSVGPENSKELFVWAVDGADDTEKYLNLGSFTVGAKGEKGDKGDQGIVGPRGIQGAKGDKGSRWVILPNGVDIPNNTIGTQDDWCLDKSGKVWYRDATGWKEFIQLLDVPVAEVETADQNKKMVRYQLGWAPLLVDEVETPEEGEQYIRKGKADGTTEWAPLEVDAVPDVPTPNIALAMVRKDGEWKQGAPIVIANDVDKHYVLKGKASWVETDVFKDAASDGKSYARKDGAWAAVVPETTNDDKLYARKTTVAGGSSWVEVPAAIIASDAPDAKNYTRSNGEWKELVTIPEPGIDATKVWGRQTTAAGTSAWVEIKKEFDTYSLLSGAAPAGNFTITPANQQCYTVPSTAARTITLGDGPSGRMITAVLVLTGTVIPTFSGNFKWNDNTAPEAAATKTVITLLWDGSEWLGAKGAGY
Physico‐chemical
properties
protein length:1107 AA
molecular weight: 116338,34310 Da
isoelectric point:4,40647
aromaticity:0,07317
hydropathy:-0,43939

Domains

Domains [InterPro]
DC_0272
ATT
1–52
DC_0272 IPR050149 G3DSA:6.20.230.10 DC_1062
DC_1340
STR
210–338
DC_1340 DC_1340 DC_2298
IPR008160
STR
314–357
IPR008160 DC_1340 DC_0309
DC_1340
STR
322–433
DC_1340
QBX32327.1
1 1107
Architecture
ATT
STR
STR
ATT
STR
RBD
ATT 1-52 | STR 210-579 | STR 582-903 | ATT 904-926 | STR 927-951 | RBD 953-1105 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA1C
[NCBI] 		2562177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32327.1 [NCBI]
Genbank nucleotide accession
MK599315 [NCBI]
CDS location
range 148646 -> 151969
strand +
CDS
ATGGCTGGTGAATCCGCATTTGAAGTTTTCGTTAACGGTGAGTTACCAAAACGTATCTCCACCGAAGACAATCCTCTTGAGGTAGTTGCAGGCAAGATCCCGGTTTCGACCGGGGCTGGCCTGGCTACAACTTTCAAAGACCCGACCGAAATCGAGGGAATGAAAGGTGAGGATGGCGCGGATGGTAAATCCGCTTATCAGCTGGCACTCGATGCTGGCTTTATTGGTACTGAAGCCGAGTGGCTCGAATCGCTGAAAGGCGAAGACGGCGCTAAAGGTGATACTGGTCTGCAAGGTAATCCTGGTGAACCGGGTCCCGTTACCAATATCAAAGGTACCGTAACTCTTGACGATTTCGAAACCAACATTGCTCCCATCGATAGTTGGGAATTTGGTGATGCTTGGTTCGTTCGTTCTTCCACTGCTACTGTACTGAAAGTATGGTCTGCCCCAGAAACCGGTTCGCCGGATGCTGGCCAGTGGATCGACTCCGGTGACATGCGTGGTCCGGAAGGTACTGGTCTTGTTATTCGTGGTCAATGGCCTGATAACCAAGAACTTCCGCCCTTGGCTGCCAAAGGCGATACCTACGGTTGGAAAAATGCTCTTTACACTTTCATGCTTGTAGCTGGTGAAGAAGATATCTTCCCTGACAACTATGCATACATCCAGATCGTGCCGATGGGTCCTGAGGGTCCTAAAGGTGATACTGGTGCCAAAGGTGATAAAGGCGACCGTGGTCTGAAAGGCGACACTGGTGCACCTGGTAAGGACGCTACTCCGTTCACTATTAAAGCTGACTTAGCTTCCGAAGATGATCTGCCTCTGGCTGGCGATGCCAAGCCTGAAGAAGCATATTCGGTTATGGTTGACGATGTACGCCATCTATTCGTCTTCTCCGTCGATGAAAACCGCTGGATGGATCTCGGTACTTGGCAGGGCCCGAAAGGTGAACCTGGTCAAGACGGTATCATCGGTGGCGACGGCCCGAAAGGGGACAAGGGCGATAAGGGTGATAAAGGCGATCCTGGTCAAGATGGTATCGATGGTCAAGACGGTGCTCCTGGTGAAAACCTGGAAATCCTCGGTACGTATCCGACCATGGCAGATCTTCTGGCCGCAGGTGCTACTCTTGTCATCAAGAAAGCTTACGCTGTTCGCGATGTTAACACCCTCTTCTACGTAGCTACTACTCCTGTTACCTCTGAAGGCGACCTGATTAACCTAGGTCAATTCAAAGGTGAGAAGGGCGACAAAGGAGATAAAGGTGACAAAGGGGATACCGGTGCAAAAGGCGATAAGGGTGACACCGGTGACGGTGGTAAGAACCTGGTTGTCTCCGGTGTTCTTCCTGACCTTGCTGCCATTCAAGCCGTACCTGATCCGCAAGAACAGGAAGCTTGGGTAGCTGCCGATAACCGCCACCTCTACATGTTCATTGATGGAACATGGGTTGACCTTGGTACTCATACTGGCGCCAAAGGCGATAAAGGGGACAAAGGCGATAAGGGTGATACTGGCGCCAAGGGTGACACTGGTGATAAAGGCGACAAAGGTGATCAGGGTGAAAACTTTGAAATCATCGCTGTTGTTGACACTGTAGGTGAAGTTCCTCCGGCCACTGCCGACAACAAAGGTAAAGCCGTTGTTGTTAAAGGCGGTGATGTTTATGTAAACATTAGTGGTACTCAGTTCGTATCTGTTGGTCCCATTGGCCAGAAAGGTGATCAGGGTGATCGTGGCGCCTCGATGCGCATCGTTGGTGAAGTAGGTTCTGTTGAAGCTCTACCTGAACTGGTAGCCGGTGAAACTGATCCCGCTGATGGCGAGGCGTACATTGTTACCGTTATCCAGGGTGATGACACCATTAAGGTAATCTACGTAGCTAACCGCTCTACGAATACCTACGATGGTCCGTTCAATATCCAGGGTCCGCAAGGTAACGATGGTCCGCAGGGTGAAGTAGGTCCTCGCGGTGAAATCGGCCAAGGTATCAAAATTGTTGGCGACTATCCGTCTGAAGCTGCTCTTACAGCTGCTCATCCGACTAGTGCTATTGGTGATGCATATTCGGTTGGTCCTGAAAACAGTAAAGAACTGTTTGTTTGGGCTGTCGATGGTGCTGATGATACTGAGAAGTATCTGAACCTGGGTAGCTTCACCGTTGGCGCCAAAGGCGAAAAAGGTGATAAGGGTGACCAAGGTATTGTTGGTCCTCGTGGTATTCAAGGTGCAAAAGGTGATAAAGGTTCTCGTTGGGTAATTCTACCGAACGGTGTCGATATCCCGAATAACACTATTGGTACTCAAGATGACTGGTGCCTTGATAAGTCTGGTAAAGTTTGGTATCGTGACGCAACTGGCTGGAAAGAATTCATCCAACTTCTGGATGTTCCTGTAGCCGAAGTAGAAACTGCCGATCAGAACAAGAAGATGGTTCGCTATCAACTTGGCTGGGCACCTCTACTGGTCGATGAAGTGGAAACCCCTGAAGAAGGTGAACAGTATATCCGTAAGGGTAAAGCTGATGGCACCACCGAATGGGCTCCGCTTGAAGTAGATGCTGTACCAGACGTTCCTACTCCCAACATTGCTCTTGCAATGGTTCGTAAGGACGGTGAGTGGAAACAAGGTGCACCTATTGTCATTGCCAACGATGTTGATAAGCATTACGTTCTGAAGGGTAAGGCTAGCTGGGTCGAAACCGATGTCTTTAAAGACGCGGCTAGCGATGGTAAGTCTTACGCTCGTAAGGATGGTGCTTGGGCTGCGGTAGTACCTGAAACTACCAATGATGATAAACTGTACGCTCGTAAAACTACTGTTGCTGGCGGGTCCAGCTGGGTAGAGGTACCGGCTGCAATTATCGCATCGGATGCTCCGGATGCCAAGAACTACACTCGTTCTAACGGTGAGTGGAAAGAACTGGTAACCATTCCGGAACCAGGTATCGATGCTACTAAAGTTTGGGGTCGTCAGACAACTGCTGCTGGTACATCGGCGTGGGTAGAGATCAAGAAAGAATTTGATACCTACTCCCTGCTATCTGGTGCTGCTCCTGCTGGTAACTTCACCATCACTCCGGCTAACCAACAGTGCTATACTGTTCCATCTACTGCTGCTCGTACTATCACTCTAGGTGATGGTCCGTCTGGCCGAATGATTACAGCTGTACTGGTTCTAACTGGTACGGTCATTCCGACCTTCAGCGGTAACTTCAAATGGAATGATAACACGGCTCCTGAAGCCGCTGCAACCAAGACTGTCATCACCCTTCTGTGGGATGGTAGCGAATGGCTCGGCGCTAAAGGTGCTGGCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
abbaceb81bb42c20b34c01e34876ad14f87c37ee02dedba14d6ec27c498fb889
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3008
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy of healthcare-associated infections Kiseleva,I.A., Aleshkin,A.A., Rubalskii,E.O., Zulkarneev,E.R., Bochkareva,S.S. and Efimova,O.G. 2017 — GenBank