Protein

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Genbank accession
ADR30483.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MINKLNKWDLNCSVFNSYDFDDCMSLNELLCRFFTKINECIEASNKSLTFLEWLYEVGLKQEVVTLLTQWKDNGTLAELISEQILTEIKQNIENNKNAIEQLQLKDTTHDEKIQALETKDNEILGDIETLKSKDTELEGSISSVSSDIETINVKIEEAKNELKILSEQILNIVNEMKIKNGVDITFFGAKDDVNYDSTQSIINAINFAKTNKYNTLFIPNGKYYVTQSLNTKGLYVVGVGTPEIPFMTWDYTRPSSDLNDFKKYFSLCQGSIIGSDYDGNIFSNGLNATNIGIIGNRRATNQNGVSQTNGGDLINLSNCRIHGCGKDGVNALYGLIATIVDNRTWLYQNGRHGIYIGKESGGYTGETNFITIKDSFINRNEKDGIKINSLGRSIHIENVDLEQNGEPSDTQRHKGNDVYSIVYGCRINIDNDGTNFTGGSIVFNNNYSEETFGLLYLETPTNRITNGVTINNNYWRPLNQNSYSCGVALKGWIENIEIMNNNLYGKDEVKILDTNVYAIKTSNNVSGGQSNPCVWKQKADYYGSIVEIGATGKSELYSFDNLITGSSFNEKFTYININKSVIPYDLQYDGKRSPLYGLVLANANNQMIGIITDVSYTNGVVKVRGDVTNNVINGKGTFYKTSGITFMSGDGSVKTIMIDWDGTVIAI
Physico‐chemical
properties
protein length:667 AA
molecular weight: 74415,41450 Da
isoelectric point:4,89784
aromaticity:0,09445
hydropathy:-0,37706

Domains

Domains [InterPro]
DC_1947
ATT
1–240
DC_1947 DC_0525
Coil
Unmapped
85–105
Coil Coil IPR011050
IPR011050
STR
181–402
IPR011050
IPR012334
STR
182–660
IPR012334
ADR30483.1
1 667
Architecture
ATT
STR
ATT 1-240 | STR 241-667
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADR30483.1
1 667
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,9906
Central domain 198 577 381 0,9709
C-terminal 578 667 89 0,7501
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-577
C-terminal
578-667

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CpV1
[NCBI] 		926066 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADR30483.1 [NCBI]
Genbank nucleotide accession
HM640230 [NCBI]
CDS location
range 5133 -> 7136
strand -
CDS
ATGATAAATAAATTAAACAAATGGGATTTAAATTGTAGCGTATTCAACTCTTATGACTTTGACGATTGTATGAGCTTAAATGAATTACTATGCAGATTTTTTACTAAAATAAATGAGTGTATAGAAGCAAGTAATAAATCCTTAACATTTCTTGAATGGCTTTATGAGGTGGGATTAAAGCAAGAAGTTGTTACATTATTAACTCAATGGAAAGATAACGGAACTCTTGCAGAGCTTATTTCAGAGCAAATACTTACAGAGATAAAACAAAACATTGAGAATAATAAAAATGCTATAGAGCAATTACAACTTAAAGATACAACTCACGACGAAAAAATACAAGCTTTAGAAACTAAAGATAATGAGATACTAGGTGATATTGAAACTTTAAAATCTAAAGATACAGAGCTTGAAGGTTCAATATCATCTGTTAGTAGTGATATTGAAACTATTAACGTAAAGATAGAAGAAGCTAAAAATGAGTTAAAAATTTTAAGTGAACAGATATTAAATATTGTAAATGAAATGAAAATTAAAAACGGTGTAGATATAACATTTTTTGGTGCAAAAGATGATGTTAATTACGATAGTACTCAATCAATTATTAACGCAATTAATTTCGCTAAAACTAATAAATATAATACTTTATTTATACCAAATGGTAAATATTATGTCACTCAAAGTTTAAATACTAAAGGTTTATATGTTGTGGGTGTGGGTACACCTGAAATACCTTTTATGACATGGGATTATACAAGACCTTCATCAGATTTAAATGATTTTAAGAAATATTTTTCATTATGTCAAGGGTCAATAATAGGTTCTGACTATGACGGAAATATTTTTTCTAACGGTTTAAACGCAACTAATATAGGTATAATAGGTAATAGAAGAGCAACCAACCAAAACGGCGTATCACAAACGAACGGTGGTGACTTGATAAATTTAAGTAACTGTAGGATTCATGGGTGTGGTAAAGATGGTGTAAATGCGCTTTATGGTTTAATTGCAACTATAGTAGATAATAGAACTTGGTTATATCAAAACGGTCGTCATGGTATTTATATTGGTAAGGAAAGTGGTGGGTATACTGGTGAAACCAATTTTATAACTATAAAAGATTCATTCATCAATAGGAATGAGAAAGATGGCATTAAAATAAATTCTCTAGGTAGAAGTATTCATATAGAAAACGTGGATTTAGAGCAAAACGGAGAACCTAGTGATACCCAAAGACATAAAGGTAATGACGTATATAGCATTGTTTACGGGTGTAGAATAAATATAGATAATGACGGTACAAACTTCACGGGTGGGTCAATTGTTTTTAATAATAATTATTCTGAAGAAACTTTCGGTTTACTTTACTTGGAAACGCCAACTAATAGAATAACTAATGGGGTAACAATTAATAATAATTACTGGAGACCATTAAATCAAAATTCTTATAGTTGTGGTGTAGCACTTAAAGGGTGGATTGAGAACATTGAAATAATGAATAATAATTTATATGGAAAAGACGAAGTTAAAATCCTTGATACTAATGTTTATGCAATTAAAACAAGTAATAATGTAAGTGGTGGTCAAAGTAATCCATGTGTTTGGAAGCAAAAAGCTGATTATTATGGTTCTATTGTTGAAATAGGAGCTACGGGTAAAAGTGAATTATATTCATTTGATAATCTTATTACTGGGAGTTCTTTTAACGAGAAATTTACCTATATTAATATAAATAAATCTGTTATACCATATGACCTTCAATATGATGGAAAAAGAAGTCCTCTTTATGGTTTAGTATTAGCCAACGCAAATAATCAAATGATTGGTATTATAACTGACGTTTCATACACTAACGGGGTCGTAAAAGTAAGAGGTGATGTTACAAACAATGTTATAAACGGAAAAGGTACTTTTTATAAAACAAGTGGTATTACATTTATGAGTGGTGACGGAAGCGTAAAAACTATTATGATAGACTGGGATGGAACTGTTATAGCTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
28c81210e33756aa56dea18059c7e6995f6b05881ee20aafe60641d6e362a1c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genome sequence and proteome of bacteriophage PhiCPV1 virulent for Clostridium perfringens Volozhantsev,N.V., Verevkin,V.V., Bannov,V.A., Krasilnikova,V.M., Myakinina,V.P., Zhilenkov,E.L., Svetoch,E.A., Stern,N.J., Oakley,B.B. and Seal,B.S. 2011 21144870 GenBank