Protein

View in Explore
Genbank accession
QCW22981.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MGLYTEHLRINSDGNIGIGTSGFTLNGKNLKIGSFGGGANDITRLELHTTSNSGTKHFSIGNNGSTLNVYDETADVERVAISTDGHVTTPTSSAVYMSCDASTPSISAGQPLQFNEKYNDRNNDYSTSTYLFTAPVTGYYMISAHVIPTNLTQNTSEELYFRINGSGGARIFLDRRKKTESDSNSFSIGGSLSYYLTKGTTVNFELNNGSNATLEQNSMASIVLLG
Physico‐chemical
properties
protein length:226 AA
molecular weight: 24279,33990 Da
isoelectric point:5,47834
aromaticity:0,08850
hydropathy:-0,39159

Domains

Domains [InterPro]
DC_0300
STR
14–226
DC_0300
IPR008983
RBD
87–223
IPR008983
IPR001073
RBD
90–226
IPR001073
IPR008983
RBD
98–217
IPR008983
IPR001073
RBD
101–221
IPR001073
QCW22981.1
1 226
Architecture
STR
STR 14-226
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCW22981.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0088
Central domain 11 209 200 0,0428
C-terminal 210 226 16 0,9921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW22981.1 [NCBI]
Genbank nucleotide accession
MK799832 [NCBI]
CDS location
range 141260 -> 141940
strand +
CDS
GTGGGTTTGTATACTGAACATCTTCGTATAAATTCTGATGGTAATATTGGAATTGGTACAAGTGGTTTTACTCTAAATGGAAAAAATTTAAAAATTGGTTCATTCGGTGGTGGTGCTAATGATATTACAAGATTAGAACTTCATACAACAAGCAATTCTGGAACTAAACATTTTTCTATTGGAAATAATGGATCTACTTTAAATGTATATGATGAAACTGCGGATGTAGAAAGAGTCGCAATATCAACAGATGGTCATGTAACTACACCGACTTCGAGTGCAGTATATATGAGTTGTGATGCTTCAACACCATCCATATCTGCTGGCCAACCACTTCAATTTAATGAAAAATATAATGATCGTAATAATGACTATAGTACATCAACCTACTTATTTACTGCTCCAGTAACTGGGTATTATATGATTTCGGCTCACGTAATTCCTACAAATTTAACACAAAATACTAGTGAAGAATTGTATTTTAGAATAAATGGTAGTGGTGGTGCTCGAATTTTCTTAGACAGAAGAAAGAAGACCGAATCAGATAGTAATAGTTTTAGTATTGGTGGATCTTTGTCTTATTATTTGACAAAAGGCACAACAGTCAATTTTGAATTAAACAATGGTAGTAATGCCACATTAGAACAAAATAGTATGGCAAGTATTGTTCTATTAGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f6f8118f1a638bc914884785e67ffd08c713cb2287a6bea91e1c69fa7a4f90bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8362
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank