Protein

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Genbank accession
YP_009111225.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MITINGNTISGNYTNGSISITTKGDNVYINGDLVHTTNDKNITVIIKGDAKEVRTTSGGINVYGNVSNGVISTSGDINVEKDILGNVSSVSGDVCANTIHGSVNTISGDITHR
Physico‐chemical
properties
protein length:113 AA
molecular weight: 11681,70710 Da
isoelectric point:5,36193
aromaticity:0,02655
hydropathy:-0,14956

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009111225.1
1 113
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0055
Central domain 11 102 93 0,7213
C-terminal 103 113 10 0,4379
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-102
C-terminal
103-113

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Av-05
[NCBI] 		1527519 Uroviricota > Caudoviricetes > Vequintavirinae > Avunavirus Av05 >
Host Escherichia coli O157:H7
[NCBI] 		83334 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009111225.1 [NCBI]
Genbank nucleotide accession
NC_025830 [NCBI]
CDS location
range 92557 -> 92898
strand -
CDS
ATGATTACAATTAACGGCAATACAATTTCTGGAAACTATACCAATGGTAGTATCTCTATCACTACTAAGGGTGATAATGTATATATCAATGGTGATTTAGTTCACACCACAAACGATAAAAACATCACAGTTATTATCAAAGGTGATGCTAAAGAGGTACGCACAACATCAGGTGGTATCAATGTTTATGGAAATGTCTCTAATGGTGTGATCTCAACATCTGGGGATATTAATGTTGAAAAAGATATTTTAGGCAATGTGTCTTCGGTGTCTGGTGATGTTTGCGCAAATACGATCCATGGTAGTGTGAACACAATATCTGGAGATATTACCCATCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed5127d9cd202a58670dd5138e15d31519a7fe5689d0a417b4e9df0aabb0dedd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7977
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50