Protein

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Genbank accession
XPT09288.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSNFTKVKTTHISHKKTDGRTVTAEVELNRISDLVGKLDFSGSLEWISDTDYATGAVVTQSNLLYQLLEGGDGTIKPSEDDGTNWEAVILGGNSETRVEEVILEEGQTEVFLDEVTTRNMALYIEGIREFDFTIASDSDTKFTLDSELPAGTRLWVVVNETIKDSSDLTVTDDKSSSRDLRDWTSGIVYNYSSTTTASMDPELVIGTRFSTTAFHEGIEGGGADYIVVPANTSSKTNGTYINLQASGLQAKLILKSPVDVRSFGASPLTSDNDREAIQEAFDTGLHVIFGGRGDYILDQDESSELELVTPGQIIEFENNGGYGYGEDIGENWVPNTRLVVKGTGTKRVRTRRLFRGSSSDPQDAPLSVAINIQAEAVELRRVSLWLNCDYSDDSPTNLGDECDVGIFVGCRVAVQLHDPQVIGYWRHSAIYLDASFDTELERFPDLKGNAYPMGQQVSGGDGTHIYNPFTRGGRMGLSILGGLPKPGETQYSDQYYDEIAGEAVNDSRGAFGFSDFLCIGGRIYGPDHHSNRRLQDPITIDGLLSEDTLSQEPDDSPGAIHISGLAGNSSSSIWGLRFIGTRISTYEMFRVRVGKASRVAFINCHIEGRGASSRMNTSGDYVDSNDYTYASYGDVCGTSETDRVSFVGGNRQLPSDGISNHYYGGDLYLQTDSGRTFTTQYSSTIGVNADIRADEGKNLRFRSGTDTVAYISADEWQVYGQYIRQMSGDLDLRAASGQKVLFRESNNLIGELSSTELTLKGQYIQQEGGDLDLRASSGERVRLRSGSSSAAAFDNTFTQLIGAGSSTVASAGNAYITESGVLSRSTSAAKYKTDVTELSDEVTDACMKIQPVTYKSLCTADDPNKEFVGFIADQAVDVNAEWMVTRATDGTIEGFEYDRMTAVHQKVLQDLMKRITELESKLADK
Physico‐chemical
properties
protein length:925 AA
molecular weight: 100946,94150 Da
isoelectric point:4,58420
aromaticity:0,08432
hydropathy:-0,40984

Domains

Domains [InterPro]
DC_1954
STR
45–925
DC_1954
IPR030392
CHP
827–922
IPR030392
IPR030392
CHP
827–882
IPR030392
XPT09288.1
1 925
Architecture
STR
STR 45-925
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPT09288.1
1 925
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,9926
Central domain 272 615 345 0,9887
C-terminal 616 925 309 0,8527
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-615
C-terminal
616-925

Taxonomy

  Name Taxonomy ID Lineage
Phage Cobetia phage Carin-5
[NCBI] 		3403038 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPT09288.1 [NCBI]
Genbank nucleotide accession
PV155638.1 [NCBI]
CDS location
range 82251 -> 85028
strand +
CDS
ATGAGCAATTTTACAAAGGTCAAGACTACTCATATTAGTCATAAGAAGACTGATGGAAGAACTGTAACAGCTGAAGTAGAATTAAATCGAATCAGTGACTTAGTAGGTAAACTCGATTTTTCAGGATCTTTAGAGTGGATCTCTGATACTGATTATGCTACTGGAGCTGTAGTTACTCAAAGTAACCTTCTGTATCAATTATTAGAAGGAGGTGATGGTACCATCAAACCTTCTGAAGATGATGGTACTAACTGGGAAGCAGTAATCCTAGGAGGTAACTCAGAAACTAGAGTAGAAGAAGTCATTCTAGAAGAAGGACAGACTGAAGTATTTCTAGATGAAGTCACTACTAGAAATATGGCACTGTATATCGAAGGTATTCGTGAATTTGATTTTACTATTGCATCCGATAGTGATACCAAGTTCACTCTTGATTCAGAACTACCTGCAGGTACTCGTTTATGGGTAGTTGTAAATGAAACAATCAAAGATAGTTCTGATTTAACCGTGACGGACGATAAATCCTCTAGTAGAGATTTGAGGGATTGGACTTCAGGAATTGTATACAATTATAGTAGCACTACTACAGCTAGTATGGATCCTGAACTAGTAATAGGTACTAGATTTTCCACTACTGCATTTCATGAAGGTATTGAAGGAGGTGGAGCTGATTATATTGTAGTACCTGCTAACACTTCTAGCAAAACTAATGGTACTTATATTAACCTCCAAGCTTCAGGACTACAAGCTAAATTAATTTTAAAATCACCAGTTGATGTTCGAAGTTTTGGTGCATCACCACTAACTTCTGATAACGATAGAGAAGCCATTCAAGAAGCATTCGATACAGGTCTTCATGTAATATTTGGTGGAAGAGGTGATTATATACTCGACCAAGATGAAAGTAGTGAGTTAGAACTAGTTACTCCAGGTCAAATAATCGAGTTTGAGAATAATGGAGGCTACGGTTATGGAGAAGATATTGGTGAGAATTGGGTACCTAATACTCGATTAGTAGTCAAAGGGACTGGTACTAAACGTGTCAGAACTAGAAGACTATTTAGAGGCAGTTCATCTGATCCTCAAGATGCTCCTCTTTCAGTAGCCATTAACATTCAAGCAGAAGCAGTAGAATTAAGAAGAGTATCATTGTGGTTGAATTGTGATTATTCTGATGATTCACCTACTAATTTAGGTGATGAATGTGATGTAGGGATCTTCGTAGGATGTAGAGTGGCTGTTCAGCTTCATGATCCACAGGTAATAGGTTACTGGAGGCACTCAGCAATCTATCTTGATGCATCATTTGATACTGAACTAGAACGTTTTCCTGACCTAAAAGGTAATGCTTATCCAATGGGTCAGCAGGTATCTGGAGGTGACGGTACTCACATTTACAATCCATTCACTCGTGGTGGCAGAATGGGTCTCTCTATCTTAGGTGGTTTACCTAAACCAGGAGAAACTCAGTATAGTGATCAGTATTACGATGAGATTGCTGGAGAAGCAGTCAATGATAGTCGTGGTGCATTCGGATTCTCCGACTTCTTATGTATAGGTGGTCGAATCTATGGTCCTGATCATCATAGTAACCGTCGTCTTCAAGATCCTATTACTATTGACGGACTACTCTCAGAAGATACTTTGAGTCAAGAACCTGATGACTCACCTGGAGCGATTCATATTAGTGGGTTAGCAGGGAATTCATCTTCTAGTATTTGGGGATTACGTTTTATAGGTACTCGAATTTCTACTTACGAAATGTTCCGAGTAAGAGTCGGAAAAGCTTCACGAGTAGCTTTCATAAATTGTCACATAGAAGGTCGTGGTGCATCCAGTAGAATGAATACTTCTGGTGATTACGTAGATAGTAATGACTATACTTATGCATCTTACGGTGACGTATGTGGCACAAGTGAGACTGATAGAGTGTCATTTGTAGGAGGTAATCGTCAGTTACCATCTGATGGCATCTCTAATCACTATTACGGTGGTGATCTTTATCTTCAAACTGACAGTGGCAGAACTTTTACTACTCAATATAGTAGTACTATTGGAGTAAATGCTGATATTAGAGCTGATGAAGGTAAAAATCTTAGATTCAGAAGTGGCACTGATACTGTAGCATATATTTCAGCTGATGAATGGCAAGTATATGGTCAGTACATTCGTCAAATGTCAGGTGATCTTGACCTAAGAGCTGCATCAGGTCAAAAAGTCCTCTTCAGAGAAAGTAACAATCTAATAGGTGAACTCAGTTCTACTGAATTAACTCTAAAAGGTCAGTACATTCAGCAAGAAGGAGGTGACTTAGATCTGAGAGCATCTAGTGGTGAGCGAGTAAGATTGAGATCAGGTAGTAGTTCAGCTGCAGCTTTTGATAATACCTTTACTCAACTTATAGGTGCTGGATCCAGTACAGTAGCTTCAGCAGGTAATGCTTATATTACTGAATCAGGTGTTTTAAGTAGATCTACTTCAGCAGCTAAGTATAAAACTGATGTAACTGAATTATCCGATGAAGTTACTGATGCATGTATGAAAATCCAACCAGTGACTTACAAGAGTCTTTGTACAGCTGATGATCCTAATAAAGAGTTTGTAGGATTTATCGCTGATCAAGCAGTAGATGTTAATGCTGAATGGATGGTAACTCGAGCTACTGATGGTACCATTGAAGGTTTTGAGTACGATAGGATGACTGCAGTTCATCAAAAAGTCCTTCAAGACTTAATGAAAAGAATCACTGAACTCGAATCGAAACTGGCTGATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2e8d939511609bb3833e0028ed0f55c511228f234c274acf5bdca796c3234d3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50