Protein

View in Explore
Genbank accession
QVJ13523.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,56
Protein sequence
MGLEVATYINQLVPTNPTGSDLKSFGDDHLRLIKSAIKNTFPNVSQAVTVTADQLNAVADTTQYVKPGMVIMWAGSLAQIPAGWKLCNGVGTTSNGIPVPNLIGAFPWGIDGSSQAVGTRGGRANIVWDGFTEGTALTLAQIPSHTHTWRTRGATTLTGSAGDSGALTGGSGKAANTNLETGPAGQGQTHNHAVKINIPLGNIPPFCSVFFIIKN
Physico‐chemical
properties
protein length:215 AA
molecular weight: 22263,87840 Da
isoelectric point:8,64278
aromaticity:0,06512
hydropathy:-0,03302

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA40
[NCBI] 		2833445 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ13523.1 [NCBI]
Genbank nucleotide accession
MZ089742.1 [NCBI]
CDS location
range 14012 -> 14659
strand -
CDS
ATGGGTCTTGAGGTCGCAACTTATATTAACCAGTTGGTGCCTACGAACCCTACCGGCTCTGATCTGAAGTCCTTTGGGGATGACCACCTGCGACTCATTAAGAGTGCTATTAAGAATACCTTCCCCAATGTTTCTCAGGCTGTCACTGTAACGGCAGACCAGCTAAACGCAGTCGCTGATACAACCCAGTATGTTAAACCTGGGATGGTTATCATGTGGGCTGGGTCACTGGCTCAGATCCCAGCAGGTTGGAAGCTTTGTAATGGTGTAGGGACTACCTCTAACGGAATCCCTGTTCCCAACCTCATTGGTGCATTCCCCTGGGGTATCGACGGATCTTCCCAGGCTGTAGGTACTAGAGGCGGTAGAGCTAACATTGTATGGGATGGGTTCACTGAAGGGACTGCCCTTACCCTAGCCCAAATCCCATCACACACCCACACTTGGAGAACTAGGGGTGCTACTACCCTCACCGGTTCTGCGGGTGACTCGGGTGCTCTGACGGGAGGCTCTGGTAAAGCAGCCAATACCAACCTTGAGACTGGTCCTGCTGGTCAAGGTCAGACTCACAACCATGCAGTAAAGATCAACATTCCGTTGGGTAATATCCCACCGTTCTGTTCTGTGTTCTTCATCATTAAGAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c11d8b0e9b9e062c11ddbb396a3c320349f0d96013d6d47ce09a22f29834059a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7396
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank