Protein

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Genbank accession
QIC50006.1 [GenBank]
Protein name
tail fiber protein gp53
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 0,44
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTAFWRFFVAWRSKKMATNWNAVLNNTNNFNDVLAILKKLLALMGDLSTLDSSEVLLRIDEIINSSVADFNEKQIQAFKDLKEAIEVASAAGAGENGWIDTLVLTLTGENLREFNKKTISTLDCIDDLATTLPWPGRTVNVRSVIKDKHLGGGTFVFSADSSKVPDGYIVVAANGGNWVKITVAFPTIDDFGGLGDDPNYDDADAFIRCALSPYTGSNIYLANRQVEYRINKQVDCKGKGIVGGGFSRQNATAYAMNSLKVRPGDYSNSNTLLNNVAFINVGAEVRDLQLVSEGVSENISGLKVDGYNFTLSNANISGFYNQVYLSNATVSFRVQNLMSISASNAGFYIADVDSKQSTTAYFDNCSWQWGKYPVLFAKEAYQCVFNNIILEYMQYGLTAGIWSNCSFNAIWAEQTRDGVARDWLVNTSYQQTFNCITNNLYIRTPWLNRADTTALAVSDNIGGVVIDKSRITLSGATGAKIQLSPSGLATLFANWYGGTNRRLLITTQPTAADSGYKTPIHINAPNSELYFGNQDETSVASVVFKRVIGATATNTPYIASDSWTKKIRKWNTYNHEVSKVGRFIAPMMLTYDVNFTTQQNNAGWSISKESTGVYRLQRDAGVTTELANPHIFVSGIFSGTGLGGGKAILPPTLQAIEAYSGSWSSFKVAAGVKLFFIDLTGALVDPMRFSVSFTLESGI
Physico‐chemical
properties
protein length:699 AA
molecular weight: 76483,27450 Da
isoelectric point:6,20190
aromaticity:0,11159
hydropathy:-0,08355

Domains

Domains [InterPro]
DC_1841
ATT
1–120
DC_1841 IPR059934 DC_0160
DC_0717
ATT
90–222
DC_0717
QIC50006.1
1 699
Architecture
ATT
STR
ATT 1-222 | STR 306-699
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIC50006.1
1 699
Domain Start End Length (AA) Confidence
N-terminal 1 201 201 0,9889
Central domain 202 517 317 0,9826
C-terminal 518 699 181 0,9726
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-201
Central
202-517
C-terminal
518-699

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage AbTJ
[NCBI] 		2507835 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii MDR-TJ
[NCBI] 		889738 Pseudomonadota > Gammaproteobacteria > Moraxellales > Moraxellaceae > Acinetobacter > Acinetobacter baumannii MDR-TJ

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIC50006.1 [NCBI]
Genbank nucleotide accession
MN524653.1 [NCBI]
CDS location
range 1 -> 2100
strand +
CDS
ATGACCGCCTTCTGGCGGTTTTTTGTTGCATGGAGATCCAAAAAGATGGCAACAAACTGGAATGCGGTTTTAAACAACACAAATAACTTCAATGATGTATTGGCAATTTTAAAAAAACTGCTAGCACTCATGGGCGATTTATCTACTCTTGATTCATCAGAGGTTCTTTTACGTATTGATGAGATTATTAACTCATCGGTTGCTGATTTTAATGAAAAACAAATTCAGGCTTTTAAGGATCTCAAAGAAGCAATTGAAGTTGCTAGTGCAGCCGGAGCAGGCGAAAACGGGTGGATAGATACACTGGTACTTACTTTAACTGGAGAAAATCTCAGGGAATTTAATAAAAAAACTATCAGTACTTTAGATTGTATTGATGATTTAGCTACTACATTGCCATGGCCAGGCCGCACCGTAAATGTACGATCTGTGATAAAAGATAAACATTTAGGGGGAGGAACTTTTGTATTTAGTGCTGATAGTTCAAAAGTTCCAGACGGTTATATTGTTGTTGCTGCAAATGGCGGGAATTGGGTGAAAATCACAGTTGCTTTTCCAACAATTGATGATTTTGGCGGTCTGGGTGACGACCCAAATTATGACGATGCGGACGCATTTATTCGATGTGCGTTGAGTCCATACACAGGTTCGAATATTTATCTTGCTAACAGACAAGTTGAATATCGCATCAATAAACAAGTTGATTGCAAGGGTAAAGGGATTGTTGGAGGTGGATTTAGTAGACAAAATGCCACTGCGTATGCAATGAACTCTCTAAAGGTAAGACCAGGTGATTATTCAAATTCAAATACCCTTCTTAATAATGTGGCATTTATTAACGTGGGCGCCGAAGTAAGAGATTTGCAATTAGTAAGTGAGGGTGTTTCAGAAAATATTTCGGGTTTAAAAGTTGATGGTTATAACTTCACACTTTCAAATGCAAATATTTCTGGGTTTTACAATCAAGTATATTTATCGAATGCAACGGTCTCGTTCCGTGTCCAAAATTTGATGTCAATTAGTGCATCAAATGCAGGGTTTTATATTGCTGATGTTGATTCTAAACAAAGTACTACTGCATATTTTGACAACTGCTCATGGCAATGGGGTAAATACCCTGTGCTGTTTGCTAAAGAAGCTTATCAGTGCGTCTTTAATAATATTATTCTTGAATATATGCAGTACGGTTTAACAGCGGGTATCTGGTCGAATTGCTCATTCAATGCAATTTGGGCAGAGCAAACAAGAGATGGGGTAGCTCGTGACTGGCTTGTAAATACTTCTTATCAACAAACATTTAATTGCATCACTAATAATCTATACATTAGAACGCCTTGGCTAAATCGAGCTGACACAACCGCTTTGGCTGTATCAGATAATATTGGGGGGGTTGTAATTGATAAAAGTCGAATTACTTTAAGCGGTGCGACGGGTGCGAAAATACAACTTTCTCCATCTGGTTTAGCAACACTTTTTGCTAATTGGTATGGTGGTACTAATCGAAGATTATTAATTACTACTCAACCGACTGCGGCAGATTCTGGGTATAAAACACCAATCCACATCAATGCACCGAATAGCGAATTGTATTTTGGAAATCAGGATGAAACATCAGTTGCAAGTGTAGTATTTAAGCGAGTAATTGGCGCTACTGCTACAAATACACCTTATATTGCGTCAGACTCGTGGACTAAAAAAATTCGAAAGTGGAATACTTACAATCACGAAGTATCAAAAGTCGGGCGTTTTATTGCACCGATGATGCTGACTTATGATGTCAACTTTACTACCCAACAAAATAACGCAGGCTGGTCTATCTCAAAAGAGTCTACGGGAGTCTATAGATTGCAACGAGATGCGGGCGTAACAACTGAATTAGCAAATCCGCACATTTTTGTTTCTGGCATTTTTTCTGGAACGGGATTAGGTGGTGGAAAGGCTATATTGCCACCGACGCTACAAGCAATTGAAGCATACAGTGGGAGTTGGTCGTCTTTCAAAGTTGCAGCTGGAGTCAAGTTGTTTTTTATAGATTTGACAGGTGCGTTAGTTGATCCAATGCGCTTCTCAGTATCATTCACACTAGAATCAGGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8754ac7cfecdf1d91c1bc1d110d9f2467fa28d6175f408540a2b829b7d3cdb1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6401
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of AbTJ, an Acinetobacter baumannii Phage, and Functional Identification of Its Receptor-Binding Modules Xu,J., Li,X., Kang,G., Bai,L., Wang,P. and Huang,H. 2020 32059512 GenBank