Protein

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Genbank accession
ASS33933.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MALGKFEGNVKVQGEPQAGAIVKVFRKSDDKKMSQATTDSAGHFVVLGLDTAIEYYMIIEEPSGNWNPRVSAKRFPVESDADPARDYILERQPFVYLRFDEAVGTAVVDAAENVSDFTYIGGDASTLNTNNPLVHGSLKALTTPVQQSPGSAVGVRRDNPLFNMLNVNWAIGMVFNMEANGLQGDGTSVLCKMAGLYSPELSTFPVTGDPSKFYIRVQYSGYSNLMRSRNLNVGQTYHIALVQDESRVLLYIDGKLDVSSRSRYASGYDQGNVTIGFGLYTGSSIFYNYGGRIDDFVVFGKELDDLDASNIYTLQTNPAASLSKTYCQFDPALKVGTVDVVSRRRIRNTTSSGHSSVLGNQPKTSGKWYFEVTRESWNIMPGVSASLPPSDGQLYPGGRADSIGLWQNTVWNNGSQIGSMPDSLPETGTIGVAVDLDARKLSYVYAGQTSVSQYNIPAGAMRIAVGNGGSDASSWGHRLNSGGAPFVLTVPAGYNPGWYEET
Physico‐chemical
properties
protein length:502 AA
molecular weight: 54366,03780 Da
isoelectric point:5,30111
aromaticity:0,10159
hydropathy:-0,27510

Domains

Domains [InterPro]
DC_0826
ATT
3–145
DC_0826 IPR013320 IPR043136
G3DSA:2.60.120.200
STR
77–313
G3DSA:2.60.120.200 IPR013320
PF13385
LEC
212–304
PF13385
DC_1713
STR
251–499
DC_1713
ASS33933.1
1 502
Architecture
ATT
STR
ATT 3-145 | STR 146-500 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASS33933.1
1 502
Domain Start End Length (AA) Confidence
N-terminal 1 129 129 0,6593
Central domain 130 328 200 0,3133
C-terminal 329 502 173 0,6590
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-129
Central
130-328
C-terminal
329-502

Taxonomy

  Name Taxonomy ID Lineage
Phage Acidovorax phage ACP17
[NCBI] 		2010329 Uroviricota > Caudoviricetes > Busanvirus >
Host Acidovorax citrulli
[NCBI] 		80869 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASS33933.1 [NCBI]
Genbank nucleotide accession
KY979132 [NCBI]
CDS location
range 31804 -> 33312
strand +
CDS
ATGGCTCTGGGAAAATTTGAAGGCAACGTGAAGGTTCAAGGGGAGCCGCAAGCAGGCGCCATCGTGAAGGTCTTCCGCAAGTCCGACGACAAGAAGATGTCTCAGGCCACTACCGACTCTGCCGGGCACTTCGTTGTGCTCGGACTCGACACGGCAATCGAATACTACATGATCATCGAGGAGCCCTCAGGGAACTGGAATCCTCGCGTGAGTGCGAAACGCTTCCCCGTGGAGAGCGATGCCGATCCCGCACGCGACTACATCCTGGAACGCCAGCCCTTTGTTTATCTCCGATTCGATGAGGCCGTGGGTACTGCAGTCGTAGACGCCGCAGAAAACGTGAGCGACTTCACCTACATCGGCGGGGATGCTTCCACGCTGAACACCAATAACCCCCTCGTGCATGGATCCCTGAAGGCGTTGACTACTCCGGTGCAACAGTCGCCGGGCTCCGCTGTCGGGGTGCGCCGAGACAATCCCCTCTTCAACATGCTGAACGTCAATTGGGCGATCGGAATGGTCTTCAACATGGAGGCCAACGGTCTCCAGGGCGATGGAACCTCAGTGCTTTGCAAGATGGCGGGCCTATACTCACCAGAGCTCAGCACGTTCCCTGTGACAGGCGACCCCAGCAAGTTCTACATCCGCGTCCAGTATTCCGGTTACTCCAACCTCATGCGGAGCCGCAATCTGAACGTGGGACAAACCTACCACATCGCTTTGGTGCAAGATGAAAGCAGGGTCCTGCTCTACATCGACGGCAAGCTGGACGTCAGCTCACGGAGCCGCTATGCCAGTGGATACGACCAGGGCAATGTCACCATCGGGTTTGGGCTGTACACTGGCAGCTCGATCTTCTACAACTATGGGGGTCGCATCGATGACTTCGTCGTCTTCGGCAAAGAACTTGACGACCTGGACGCCAGCAACATCTACACGTTGCAGACCAATCCGGCGGCTTCCCTTTCGAAGACCTACTGCCAGTTCGATCCCGCGTTGAAGGTGGGTACTGTAGACGTCGTCAGCCGGCGTCGCATCCGCAACACCACGTCAAGCGGCCATTCCTCAGTGCTCGGTAATCAGCCGAAGACGTCAGGCAAGTGGTACTTCGAGGTGACCCGGGAGTCGTGGAACATCATGCCGGGCGTGTCCGCAAGTCTGCCCCCATCGGATGGACAGCTCTACCCCGGAGGGCGTGCCGACTCCATTGGCCTATGGCAGAACACCGTGTGGAACAATGGATCGCAGATCGGCTCGATGCCCGACAGCCTCCCCGAGACTGGAACAATCGGTGTCGCCGTTGACTTGGATGCGCGCAAGCTCTCCTATGTCTACGCTGGACAGACGAGCGTGAGTCAATACAACATCCCCGCGGGTGCGATGAGGATTGCAGTCGGCAACGGCGGCTCAGACGCTAGCTCTTGGGGCCATCGCCTGAACTCGGGAGGCGCGCCATTTGTGCTGACCGTTCCGGCGGGCTACAACCCTGGCTGGTACGAGGAGACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
efeed11b564a7918d50439ac81c5e7f2ace414fa14a1abb1b359cb11354743a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8336
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of novel bacteriophage infecting the causal agent of bacterial fruit blotch, Acidovorax citrulli Midani,A.R., Park,S.-H. and Choi,T.-J. 2020-06-03 — GenBank