Protein

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Genbank accession
GENB_99d04532a8b8 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFITGSATSFSDLRTALINGCVANGWSNSGNILWKGGSYFEITATSTYLQIYGGTGQSGGVLSDKSPHGARLGGSYVTFPISYDLHIFDNPDEVYLVVNYNTDYYQQISFGTTSIDGGGYGPWFTGAHNTAYGPSGYNGMNVGNGFYYLSSYCYASVSTNALGLFNQASWAGEVAASFVYTTANGTPGWYGYNSGATSARLSNGGSASLVAGLLNCTPVGFNGGSVLLPIKATLDMGSNGRAVVASLTNARFCRIDNNLPGEIISYGSEQWKVYPWLRKSTASRNGVNNSTSAPPNHSGTMGYAVRYTGV
Physico‐chemical
properties
protein length:311 AA
molecular weight: 32763,74280 Da
isoelectric point:6,87805
aromaticity:0,13505
hydropathy:-0,12026

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_99d04532a8b8
1 311
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0227
Central domain 11 209 200 0,0200
C-terminal 210 311 101 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-311

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_PAO1_Ab19
[NCBI] 		1548912 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
LN610584.1_CDS_[49936..50871] [NCBI]
Genbank nucleotide accession
LN610584.1 [NCBI]
CDS location
range 49936 -> 50871
strand +
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
941d4456c708cc4e98bbeb84cbbca24e1b4461310e1ad0208b7b85ae9eb508bd

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6401
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50