Protein

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Genbank accession
QQO92323.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MAITFRTSLGTALTHAQMDENFSSVYFSSSIHDIPDSTSKELKLWFDTDVPTPVAYHSVELPAPGGVGTVTIDQDGDNRLVTANGNGSIQGEPNFTFDGDLLTLTGRFEPLDSTGNLSIGVNAGGNANEANNILIGADAGYDLENQDNLVIGNSSLRIAIGEANTVIGNQSVQNLNIGDNNTALGYGTALNVDNGSGNVYLGYQAGPLIENVTQDNKLYINNHISDTPLIFGDFATGQVIFNSQVSASVFSGSFVGNGSALTGVSTEWDGTRDGNAEITGSLIVSGGAGSTVDFTNVSSISGSIFSGSFVGDGSGLTGIVSTSEWDGTRDGDAEITGSFIVSGSTPTIDLKGVTTIDQNIKIHNPTDSSIGIGENTLNNSSNASVALGRYAGTYAEKSTTLVGYSAGQRAGKESTYVGFQAGAGFDGSYSTGIGSQVLTKARNSSHETALGFGTLYKIGSNDGGGYANVAIGSQAFASLEDGAYNVAVGAMAFNNLLVGKANVAIGCEAGSPSLKKGFNNVYLGPFTGRDDVDEEENQLYIHNRRTNDALIRGDFGQKILTLNAIQIFLPELQQGPSGLPPGALYLDGNVVCVAI
Physico‐chemical
properties
protein length:595 AA
molecular weight: 61513,56580 Da
isoelectric point:4,27477
aromaticity:0,07731
hydropathy:-0,11227

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQO92323.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 89 89 0,7056
Central domain 90 525 437 0,6335
C-terminal 526 595 69 0,8828
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-89
Central
90-525
C-terminal
526-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Flavobacterium phage vB_FspM_immuto_13-6C
[NCBI] 		2801476 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Flavobacterium sp. LMO8
[NCBI] 		2654244 Bacteroidota > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Flavobacterium >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO92323.1 [NCBI]
Genbank nucleotide accession
MW353177.1 [NCBI]
CDS location
range 95156 -> 96943
strand +
CDS
ATGGCAATAACATTTAGAACAAGTTTAGGAACAGCTCTCACCCATGCACAAATGGATGAGAACTTCTCTTCTGTATATTTCTCAAGTTCCATTCACGATATACCTGACTCTACTTCAAAAGAGTTAAAATTATGGTTCGATACAGATGTACCTACACCGGTAGCGTATCACAGTGTTGAATTACCAGCACCAGGAGGAGTAGGAACAGTAACTATTGACCAAGATGGAGATAATAGACTAGTCACTGCAAATGGAAATGGATCAATTCAAGGAGAACCAAACTTTACCTTTGACGGAGATTTACTAACTCTAACAGGTAGATTTGAACCGCTTGACTCAACAGGAAATCTAAGTATAGGAGTAAATGCAGGAGGAAATGCTAACGAGGCTAACAACATACTTATTGGTGCAGATGCAGGGTACGATCTAGAGAACCAAGATAACCTTGTAATAGGTAACTCTTCTTTACGAATTGCAATAGGAGAAGCAAATACAGTAATAGGTAACCAATCAGTACAGAATCTAAATATAGGAGATAACAATACAGCCTTAGGGTACGGTACTGCATTAAATGTAGATAATGGTAGCGGTAACGTATACTTAGGATACCAAGCAGGACCATTAATAGAAAATGTAACACAGGATAATAAACTTTATATTAACAACCACATATCAGACACACCTCTTATTTTTGGAGATTTTGCTACAGGTCAAGTAATATTTAACAGCCAGGTGTCTGCATCAGTTTTCTCTGGTTCTTTCGTAGGAAATGGATCAGCCTTAACAGGAGTATCAACTGAATGGGACGGTACCAGAGACGGTAATGCTGAAATAACAGGATCATTAATTGTATCAGGAGGAGCAGGGTCTACAGTAGATTTTACAAACGTTTCTTCAATATCAGGATCAATATTCTCAGGATCATTTGTAGGAGACGGATCAGGATTGACAGGTATTGTCTCTACTTCAGAATGGGACGGTACTAGAGATGGTGATGCAGAGATAACAGGGTCATTTATTGTATCAGGATCTACACCAACTATCGACCTAAAAGGTGTTACAACTATTGATCAAAATATCAAAATACATAATCCAACCGATTCATCAATAGGTATAGGGGAAAACACATTAAACAACTCATCAAATGCTAGTGTAGCATTAGGGAGATATGCAGGGACATATGCAGAAAAGAGCACTACCTTAGTAGGATACTCAGCAGGGCAAAGAGCAGGAAAAGAGTCAACATACGTAGGGTTCCAAGCAGGAGCAGGATTTGATGGTAGTTACTCAACAGGGATAGGGAGTCAAGTGTTAACTAAAGCTCGAAACTCGAGTCATGAAACTGCTTTAGGTTTTGGAACATTGTATAAAATAGGAAGTAATGACGGAGGCGGGTATGCAAATGTAGCGATAGGATCACAAGCTTTTGCATCTTTAGAAGATGGTGCATATAACGTAGCTGTAGGTGCAATGGCTTTTAATAACCTACTAGTAGGTAAAGCCAATGTAGCTATAGGTTGCGAAGCAGGAAGTCCTAGCTTAAAAAAAGGTTTCAATAACGTATACCTAGGGCCTTTCACAGGACGTGACGATGTAGATGAAGAAGAAAATCAACTTTATATACATAATCGAAGAACAAACGATGCTTTAATAAGAGGAGATTTTGGACAAAAAATACTAACCTTAAATGCAATACAGATATTTCTACCAGAACTACAGCAAGGACCGAGTGGATTACCACCAGGAGCTTTGTACCTAGATGGAAATGTAGTTTGTGTAGCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c44b0b4a1790f03a0e5690d9a2141c3e6e7f396284b23ac1ace13f99fd6b8f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7339
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dynamics of Baltic Sea phages driven by environmental changes Hoetzinger,M., Nilsson,E. and Holmfeldt,K. — — GenBank