Protein

View in Explore
Genbank accession
QDK00080.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MHTPLGQVAIQGSDVRIKDNFKLPKSGAWERIEQIGIVEFTYKGNVVPQRGYLAQQMEAIDPIYVFSGGQSVDDNGKEFEILNVNDKAVMADIITVVQELQKQIVDYKEQLEYMQRELNALRSSK
Physico‐chemical
properties
protein length:125 AA
molecular weight: 14204,00380 Da
isoelectric point:4,98912
aromaticity:0,08000
hydropathy:-0,39520

Domains

Domains [InterPro]
DC_1877
STR
3–125
DC_1877
IPR030392
CHP
13–111
IPR030392
IPR030392
CHP
13–62
IPR030392 Coil
QDK00080.1
1 125
Architecture
STR
STR 3-125
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS-26175I
[NCBI] 		2576478 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus ev26175I
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK00080.1 [NCBI]
Genbank nucleotide accession
MK907267.1 [NCBI]
CDS location
range 114144 -> 114521
strand -
CDS
ATGCATACTCCTTTAGGGCAAGTTGCTATTCAAGGTTCTGATGTTCGTATCAAAGACAATTTTAAATTGCCGAAATCGGGTGCGTGGGAACGAATTGAACAAATAGGGATCGTAGAATTCACATATAAAGGAAATGTAGTTCCCCAGCGTGGGTATTTAGCACAGCAGATGGAAGCTATTGACCCTATTTATGTTTTTAGTGGAGGTCAGTCTGTAGATGATAATGGAAAAGAATTTGAGATTCTAAACGTAAATGATAAGGCTGTTATGGCTGATATTATCACAGTTGTACAGGAACTACAAAAACAAATAGTGGACTATAAGGAACAGTTAGAATATATGCAGAGAGAACTTAATGCACTAAGAAGTTCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc7caad6ba4a23a3ad6cdff4aec2779a3f9be5ec1d4cbd04eec0c912e1c890a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Occurrence of Escherichia coli-Infecting Bacteriophages in Clinical Samples Pacifico,C., Hilbert,M., Sofka,D., Dinhopl,N., Pap,I.-J., Aspoeck,C., Carrico,J.A. and Hilbert,F. 2019 — GenBank