Protein

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Genbank accession
WPK20505.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MTQGTYQAAAVQAVQAINLRPAFLDERSVGSMGSNLQLLANVESDMTDETWSTMLNNVCMTYGVSNSAPTNKPYGFSNGTAFIPVHGSLINRFGGSWGFVTGYSYIRRAHAMALNDPDVERIVYDVNSGGGEAAGCMELSDEIFSRRGEKPTLAVINSSCYSAAYAIASACDAISITPSGGAGSIGALIIHADMSKMLSDVGIKVSVIRAGDRKAETNPFEELSEQARAELQSGVNACRKTFVATVARNRGLSEKLVFDTEAKTYDANDAKDLGLVDRVESPEMALHNFINGTESETDMAVKNTNAEQPTINASEEQAKGAKAEQARIKGILGCDEAKGRESLAQHIAFNTSMSEEDAKAMLNASPVEKAEEPKQEEKPNAFKKAMDEGEQPGIKAEPQDTDKPLATDENNSLLDDLSGLGYFGN
Physico‐chemical
properties
protein length:425 AA
molecular weight: 45441,05760 Da
isoelectric point:4,71209
aromaticity:0,05882
hydropathy:-0,39412

Domains

Domains [InterPro]
IPR029045
Unmapped
72–281
IPR029045
IPR033855
ENZ
75–300
IPR033855
G3DSA:3.90.226.10
Unmapped
77–302
G3DSA:3.90.226.10
IPR033855
ENZ
79–286
IPR033855
PTHR33209
Unmapped
104–366
PTHR33209
IPR002142
ENZ
147–286
IPR002142
G3DSA:6.20.330.10
Unmapped
190–252
G3DSA:6.20.330.10
WPK20505.1
1 425
Architecture
ENZ
ENZ 75-300 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SD-14_S20
[NCBI] 		3096170 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK20505.1 [NCBI]
Genbank nucleotide accession
OR699187.1 [NCBI]
CDS location
range 41362 -> 42639
strand -
CDS
ATGACGCAAGGCACTTATCAAGCTGCTGCCGTACAAGCGGTACAAGCTATTAATCTACGCCCGGCGTTTCTGGACGAACGTTCAGTCGGTTCTATGGGGAGTAACTTACAGTTGCTCGCTAACGTAGAGTCCGACATGACAGACGAAACTTGGTCAACAATGCTAAATAACGTGTGTATGACGTATGGGGTGTCTAACAGCGCACCAACTAACAAACCATACGGATTCTCTAACGGAACCGCTTTCATTCCGGTACACGGCTCTCTAATTAACCGCTTCGGCGGTTCATGGGGATTCGTTACAGGATATAGCTATATTCGTAGAGCACACGCAATGGCCTTGAATGATCCGGACGTCGAGAGAATCGTCTATGACGTTAATTCGGGTGGAGGCGAGGCAGCCGGTTGTATGGAACTATCGGACGAGATTTTCAGTCGTCGCGGTGAAAAACCTACACTGGCCGTCATCAACTCAAGTTGCTATTCTGCTGCTTACGCGATCGCAAGTGCGTGTGACGCGATAAGTATCACGCCCTCGGGTGGCGCGGGTTCAATTGGGGCGTTGATTATTCACGCTGATATGTCTAAAATGTTGTCTGACGTAGGAATTAAAGTATCTGTGATACGCGCCGGCGACAGAAAGGCAGAAACCAACCCTTTCGAGGAACTGAGCGAACAAGCAAGAGCAGAGCTACAATCAGGCGTCAACGCTTGTAGAAAAACTTTTGTAGCAACCGTAGCAAGAAATCGCGGTTTGTCGGAAAAGTTAGTATTCGACACCGAAGCTAAAACGTACGACGCGAATGACGCTAAAGACTTAGGTCTAGTTGACCGCGTTGAGTCGCCAGAAATGGCATTACACAACTTCATTAACGGAACAGAGAGCGAAACTGATATGGCCGTAAAAAACACAAACGCGGAGCAACCGACAATCAATGCGTCCGAAGAACAAGCTAAAGGTGCGAAAGCAGAACAAGCGCGTATCAAGGGCATTCTTGGTTGTGATGAAGCAAAAGGGCGCGAATCGTTAGCACAACACATCGCGTTCAACACCTCAATGAGCGAAGAAGATGCTAAGGCAATGCTTAACGCTTCTCCGGTCGAGAAAGCGGAAGAACCAAAGCAAGAAGAAAAGCCGAACGCTTTTAAGAAAGCAATGGACGAAGGCGAACAGCCGGGCATCAAAGCCGAGCCACAGGACACGGATAAGCCCTTAGCAACGGACGAGAATAACTCGTTATTAGACGACCTTTCAGGTCTTGGCTATTTCGGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
086afcefc1f9f58bbab5db41abfa4ced52267baadf365634ea20907d2dc67de5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8229
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence a group of lytic Salmonella phages Dlamini,S.B., Montso,P.K., Ateba,C.N., Mnisi,M.C. and Mlambo,V. 2023-09 — GenBank