Protein

View in Explore
Genbank accession
QBX24419.1 [GenBank]
Protein name
hyaluronate lyase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSKEVASARIQHRGMTKQEWESSSDILMEREIGIDMTTGYPKVGDGKNKFKDLKDLRGPMGPQGPSGERGLTGPIGPRGPAGKPGTTDYNQLQNKPNLDAFAQKKETNSKITKLESSKADKSAVYSKAESKIELDKKLSLTGGIVTGQLQFKPNKSGIKPSSSVGGAINIDMSKSEGAGVVVYSNNDTSDGPLMSLRTGKETFNKSALFVDYKGTTNAVNIVMRQPTTPNFSSALNITSDNENGSAMQLRGSEKALGTLKITHENPNVEAKYDENATALSIDIVKKQKGGKGTAAQGIYINSTSGTTGKLLRIRNLSDDKFYVKSDGGFYAKETSQIDGNLKLKDPTANDHAATKAYVDKAISELKKLILKK
Physico‐chemical
properties
protein length:372 AA
molecular weight: 39961,66140 Da
isoelectric point:9,48938
aromaticity:0,05108
hydropathy:-0,69624

Domains

Domains [InterPro]
SSF69349
STR
8–370
SSF69349
IPR041352
ATT
10–47
IPR041352 G3DSA:1.20.5.320 IPR009860
QBX24419.1
1 372
Architecture
ATT
STR
ATT 8-47 | STR 48-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX24419.1
1 372
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9003
Central domain 146 344 200 0,1419
C-terminal 345 372 27 0,9873
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-344
C-terminal
345-372

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan186
[NCBI] 		2548034 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus equi
[NCBI] 		1336 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX24419.1 [NCBI]
Genbank nucleotide accession
MK448867 [NCBI]
CDS location
range 32692 -> 33810
strand +
CDS
ATGTCAAAAGAAGTTGCATCAGCAAGGATACAGCATAGAGGCATGACCAAACAAGAGTGGGAATCAAGCTCCGATATCTTAATGGAGCGAGAAATTGGAATTGATATGACTACGGGTTACCCAAAAGTTGGTGATGGCAAAAATAAGTTCAAGGACTTAAAAGACTTGCGCGGCCCTATGGGACCTCAAGGTCCTTCAGGAGAAAGAGGCCTAACTGGCCCAATTGGTCCTCGGGGCCCTGCTGGCAAGCCTGGAACGACAGATTATAATCAACTCCAAAATAAACCAAATCTAGATGCGTTTGCACAAAAAAAAGAAACTAATAGTAAAATCACCAAATTAGAATCAAGCAAAGCAGATAAAAGCGCTGTTTACTCAAAAGCAGAGTCAAAAATAGAGCTAGACAAAAAATTGAGTTTGACAGGCGGCATAGTGACAGGACAACTACAGTTTAAACCTAATAAAAGTGGTATTAAACCCTCATCTTCCGTAGGAGGAGCGATTAACATTGATATGTCTAAATCGGAAGGTGCTGGTGTTGTTGTCTATTCTAACAATGATACCAGTGATGGGCCGTTAATGAGCTTGCGGACGGGTAAAGAGACCTTCAATAAATCAGCGCTTTTTGTCGATTATAAGGGAACAACAAATGCCGTTAATATTGTGATGCGTCAGCCAACCACCCCCAATTTTTCATCGGCGCTTAATATTACTAGCGACAATGAAAATGGTAGTGCAATGCAGCTACGAGGGTCAGAAAAAGCGCTAGGAACGCTCAAAATCACACACGAAAACCCAAACGTTGAGGCAAAATACGATGAAAACGCTACAGCGTTATCTATTGATATCGTTAAAAAACAGAAAGGCGGAAAAGGTACTGCTGCTCAAGGAATCTACATTAACTCAACATCAGGCACGACAGGGAAGTTGCTTAGGATTAGAAACCTTAGTGATGATAAGTTCTACGTCAAGTCTGACGGTGGTTTTTATGCCAAGGAAACTTCGCAGATTGATGGCAACCTGAAACTCAAGGACCCCACAGCGAATGATCATGCGGCAACCAAAGCTTATGTAGATAAAGCAATTTCTGAGTTAAAAAAACTCATACTAAAAAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1c72198dabc8dabbde99f23b04b2ac9a8396ef6f72f7adffd7964354e4f52ed5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7398
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank