Protein

View in Explore
Genbank accession
YP_011992533.1 [GenBank]
Protein name
tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,78
Protein sequence
MTDKLIRELLIDVKQKGATRTAKSIENVSDALENAAAASELTNEQLGKMPKTLYSIERAADRAAKSLTKMQASRGMMGITKSMDSIGAKLDDLAIAMIEVSDKLESGFTHVGKSVKAMGNDVAAATEKVQDRLYDTNRALGNTARGFNDTTTAAGRASRAIGNTSGSARGATRDFAAMAKVGGSLPLMYAAIASNVFVLQSAFEQLKMGDQLNRLEKFGTIVGTQTGTPVQTLARSLQEAAGYAISFEEAMRQASSASAYGFDAEQLNKFGLVARRAAAVLGVDMTDALNRVIKGVSKQEIELLDELGVTIRLNDAYADYVKQLNAANTGITYNVNSLSTFQKQQAYANAVIAESTKRFGYLDDVLRATPWEQFAANADAALRKVQQAAAKYLGPVIDSINAVFYTSQASISASAARAQEETNRQIDPTNVGAVALSLSASEEGYNKALDMYKESLEKRNKLKADLDKRMQQADASTAGAIRLVAQGAPVGLAAGGFEVGGVRIGSSEENQKFIADTAALALQVERLDKEVEDSTGNLNAWKSAYQAAGAAAAKANPEFQKQINLQKDANDPDAVYDFNSATLKGLTEQQKAYDQAKKTASDLANDIQNIAQNTNTAAKTSASLSDTIKTIESLSAGTGKNADEYVKSLNLGYNTLSEMKTASQALAGYVKLTGNETKNQLEVQQKIAEVYNQTKDKEKAQEAGRRLEIQQLEEQEAALKRVLETNKGNKAIEGEIAKIQLERIKITNQGMEAQKKVKDYTDKILGVDREIALLNNRTMTDTQYRLAQLNLELTIEKEKYEWYTKQADKQKEAEQSRRSQAQIEREIWKFRQDQQAEMTSKRQEAFENTLTSMFPLAGEMQKMEMQLDFYTQMKELTKGNANEQMRWNAEIAKTRAQMSALTAQRNAQMQQQVGSSVGATYTPTTGLSGADKDFADMQNRMSSYDQAISKLSELNSEATAVAQSMGNLTNSMIQFSQGSLDTTSLVAAGMQTVSSMIQYSVGQQVSAIDAAIAAEQKRDGKSEQSKAKIKKLEAEKLKIQQDAAKKQIIIQTAVAVMQAATAVPYPFSIPLMVAAGLAGAMALAQASSASGMSSIGDSGAETAGYLTLGERQKNVDVSMSANAGELSYIRGDQGIGNANSFVPRAEGGNMYPGVSYQMGEHGTEVITPMVPMKATPTDELKGSSKSTSGRPIVLNISTMDAASFRDFASSNSAAFRDAVEQALNENGTTLKSLGNS
Physico‐chemical
properties
protein length:1236 AA
molecular weight: 133191,12000 Da
isoelectric point:5,78390
aromaticity:0,05421
hydropathy:-0,43479

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 IPR056208
Coil
Unmapped
586–613
Coil Coil Coil
YP_011992533.1
1 1236
Architecture
TAS
STR
TAS
TAS 1-81 | STR 82-1198 | TAS 1199-1234 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SuperGirl
[NCBI] 		2851993 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus supergirl
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011992533.1 [NCBI]
Genbank nucleotide accession
NC_105116 [NCBI]
CDS location
range 11157 -> 14867
strand +
CDS
ATGACTGATAAGCTAATACGAGAACTACTTATAGATGTAAAGCAGAAAGGGGCAACCCGTACTGCAAAATCTATTGAGAACGTTTCCGATGCGTTAGAAAATGCTGCTGCCGCTTCCGAACTGACTAATGAACAGTTAGGAAAAATGCCCAAAACTCTTTACTCCATTGAGAGGGCGGCGGATAGAGCAGCTAAAAGTCTAACTAAAATGCAGGCTAGCAGAGGTATGATGGGCATCACCAAATCTATGGATAGTATTGGTGCTAAGTTAGATGACCTTGCTATTGCTATGATCGAGGTATCCGATAAGCTAGAATCTGGATTTACACACGTTGGTAAATCTGTTAAGGCGATGGGTAATGATGTAGCTGCTGCAACTGAAAAAGTTCAAGATAGATTATATGATACTAACCGAGCACTAGGTAATACTGCTAGAGGCTTTAACGATACAACTACCGCTGCAGGGCGTGCTAGTCGTGCAATTGGTAATACTTCTGGTTCAGCACGTGGTGCTACTCGTGACTTCGCAGCAATGGCTAAAGTGGGGGGTAGTTTACCTCTTATGTATGCTGCTATCGCATCTAACGTGTTCGTTCTACAATCTGCATTCGAACAACTTAAGATGGGTGACCAGTTAAACCGTCTTGAGAAGTTTGGTACTATTGTTGGTACTCAAACAGGTACTCCTGTACAAACCCTAGCTAGATCTCTACAAGAGGCCGCTGGTTATGCAATCTCCTTCGAAGAAGCAATGAGACAGGCATCCTCTGCTTCTGCATATGGATTCGATGCTGAACAACTTAATAAATTTGGTCTAGTAGCTCGTCGTGCTGCTGCTGTTCTTGGTGTTGATATGACTGATGCACTTAACCGTGTAATCAAGGGTGTATCTAAGCAAGAAATCGAACTTCTAGATGAACTTGGTGTTACTATTCGTCTTAACGATGCATATGCTGACTACGTTAAACAGTTAAATGCTGCTAACACAGGTATTACGTATAACGTCAATAGTCTTTCTACTTTCCAAAAGCAACAAGCATATGCTAACGCAGTAATCGCTGAATCTACTAAACGTTTCGGCTATCTGGATGACGTACTTCGTGCAACTCCGTGGGAACAGTTTGCTGCTAACGCTGATGCTGCACTGAGAAAAGTTCAACAGGCTGCTGCTAAGTATTTAGGGCCGGTAATTGATTCTATCAACGCAGTATTCTATACTTCTCAAGCGTCTATCTCGGCTTCTGCTGCTAGAGCACAGGAAGAAACTAACCGCCAGATTGATCCAACTAACGTTGGTGCTGTAGCTTTAAGTCTTTCCGCTTCTGAGGAAGGATATAATAAAGCTCTTGATATGTACAAAGAATCTCTAGAAAAGCGTAATAAGTTAAAAGCTGATCTAGATAAGCGTATGCAGCAAGCAGATGCATCTACAGCAGGGGCTATTCGTTTAGTTGCTCAAGGTGCGCCGGTAGGGTTAGCTGCAGGAGGTTTTGAAGTAGGAGGAGTTCGCATAGGATCTTCTGAAGAAAACCAGAAATTTATTGCAGATACTGCTGCATTAGCTCTCCAGGTAGAGCGTCTTGATAAGGAAGTAGAGGATTCAACTGGCAATCTTAATGCATGGAAATCGGCATACCAAGCTGCTGGTGCTGCAGCTGCTAAGGCTAATCCAGAATTCCAGAAGCAAATTAACCTACAGAAAGATGCAAATGACCCTGATGCGGTTTATGACTTCAACTCTGCAACTCTGAAAGGACTGACAGAACAGCAGAAAGCATATGATCAGGCTAAGAAAACTGCTAGTGATTTAGCTAACGATATCCAGAACATCGCTCAGAATACTAATACTGCGGCTAAAACTAGTGCATCCCTATCAGATACGATTAAGACTATTGAGTCTCTTTCTGCTGGTACTGGTAAAAATGCTGATGAGTATGTTAAGAGCCTGAACTTAGGATATAATACTCTTAGTGAGATGAAGACTGCTTCTCAAGCTCTTGCTGGTTATGTAAAATTAACTGGTAATGAGACTAAGAATCAGTTAGAAGTTCAGCAGAAGATTGCCGAAGTGTATAACCAGACTAAGGATAAAGAGAAAGCACAGGAAGCTGGTAGACGTCTGGAAATCCAACAGTTAGAAGAACAGGAAGCAGCTCTTAAGCGTGTCCTAGAAACTAACAAAGGTAACAAAGCAATCGAAGGTGAAATAGCTAAGATTCAGCTAGAACGTATTAAGATCACTAACCAGGGTATGGAAGCTCAGAAGAAGGTTAAGGACTATACCGATAAGATTCTTGGTGTTGATCGTGAAATTGCTCTCCTGAATAACCGTACTATGACAGATACTCAATATCGTTTAGCACAGTTAAATCTTGAATTGACCATTGAAAAAGAGAAGTACGAATGGTATACAAAACAAGCTGATAAACAGAAAGAGGCTGAACAGTCTAGACGTTCTCAAGCCCAAATTGAACGTGAAATATGGAAATTCCGTCAGGACCAGCAAGCTGAAATGACCAGTAAAAGGCAAGAAGCCTTTGAAAATACTCTAACTTCCATGTTCCCTCTGGCAGGGGAAATGCAAAAAATGGAAATGCAGTTAGATTTTTATACTCAGATGAAAGAACTTACCAAAGGTAATGCTAACGAGCAAATGCGCTGGAATGCTGAAATAGCTAAGACAAGGGCTCAGATGTCAGCTTTAACAGCACAACGTAATGCTCAGATGCAGCAACAGGTAGGTTCTTCTGTTGGAGCTACTTATACTCCTACAACTGGCCTATCTGGAGCAGATAAAGATTTTGCTGATATGCAGAATAGGATGTCTTCGTATGACCAAGCAATTTCTAAACTATCTGAGTTAAATTCCGAAGCAACTGCTGTAGCTCAAAGCATGGGTAATTTAACTAACTCTATGATCCAGTTCTCTCAAGGGTCTCTGGATACTACCTCTCTAGTAGCGGCTGGTATGCAAACTGTATCTTCAATGATTCAGTATAGTGTTGGTCAACAGGTAAGTGCTATTGATGCAGCTATTGCAGCAGAACAGAAACGTGATGGTAAATCTGAGCAATCCAAAGCTAAGATCAAGAAGTTAGAGGCTGAAAAGCTCAAGATCCAGCAAGATGCAGCTAAGAAGCAAATCATTATCCAGACGGCAGTAGCGGTGATGCAAGCAGCAACAGCTGTTCCATATCCATTCTCTATTCCTCTGATGGTTGCAGCTGGTTTAGCAGGTGCTATGGCTCTTGCTCAAGCATCCTCTGCATCTGGTATGTCTTCTATTGGGGACTCGGGTGCTGAGACGGCTGGTTACTTAACTCTTGGAGAGCGCCAGAAGAACGTAGACGTTTCTATGTCGGCTAACGCAGGTGAACTTTCTTATATTCGAGGAGATCAAGGGATTGGTAATGCGAACTCTTTCGTACCTCGTGCAGAAGGTGGTAATATGTATCCTGGAGTTAGTTACCAGATGGGTGAGCACGGTACCGAAGTAATCACTCCTATGGTTCCAATGAAGGCTACTCCTACTGATGAACTCAAAGGATCTTCAAAAAGTACATCGGGTAGACCTATTGTGCTGAACATTAGTACGATGGATGCGGCTAGCTTCCGAGATTTTGCTTCGAGCAATAGTGCTGCTTTCAGGGATGCCGTGGAACAGGCTCTTAATGAGAATGGAACCACCCTGAAATCACTTGGTAATTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7309ffacf60ec4c624cc9eb3090b1a02e2923acdae121a28c8d013d15e5da470
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4274
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank