Protein

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Genbank accession
YP_010113446.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,72
Protein sequence
MKKLKIVQNNVQEKTKDSVVEKLYALTKSDDTTPAIAESAELEGNVRVNAAYEDSVTYLRNKFPNLTIDVTDNNYYIRFADKEVERVLLENGVGNGVGITKTDARRTNVNQWFRENKTITSFDEFEWFDNETISNDAFRGCEHLRSIYLTNTKIIGHRAFWWCPNLSGTLSLPNLTSNLGEAAFRETGILKIENLNGTNLTNWGTFFKCHNLTEANLGDTISIIGSNTFFECSSLVTVNLPETIIKIGDYAFKSTKINNDINLPNLVSLGAGAFENTLVKNVVNIGTITEYNNCFGNTPITKLTLPETVTRIERIDNSQLTQLNFVPENITYLGHVAIKAPAAKLDVLNFCNVTTAVQKLFNITVNQCYMPKITKGVESGYYSNNAYHTPFFSLDRIKNSFTCGLLYLKDMLILYPATFTNSKITNLVINNETPPEWRNTNNISDDQANDGQKKSLVFIWSDVSNIYVPDAAVITYQQDENWLSVADKIKPLSELPSVNTKTEYDQLSDVNKLNTIIKEYM
Physico‐chemical
properties
protein length:521 AA
molecular weight: 58719,56420 Da
isoelectric point:5,26428
aromaticity:0,09789
hydropathy:-0,30000

Domains

Domains [InterPro]
IPR032675
STR
99–259
IPR032675 IPR032675
IPR053139
Unmapped
122–403
IPR053139
SSF52058
STR
130–277
SSF52058
IPR026906
STR
132–256
IPR026906
YP_010113446.1
1 521
Architecture
STR
STR 99-492 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010113446.1
1 521
Domain Start End Length (AA) Confidence
N-terminal 1 49 49 0,9104
Central domain 50 435 387 0,9256
C-terminal 436 521 85 0,6084
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-49
Central
50-435
C-terminal
436-521

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr272_1
[NCBI] 		2772094 Uroviricota > Caudoviricetes > Crassvirales > Oafivirinae > Buhlduvirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010113446.1 [NCBI]
Genbank nucleotide accession
NC_055903 [NCBI]
CDS location
range 22713 -> 24278
strand +
CDS
ATGAAAAAACTAAAAATAGTACAAAACAACGTACAAGAAAAGACAAAAGATTCTGTAGTAGAAAAACTTTACGCTTTGACAAAGAGTGACGATACGACTCCGGCTATTGCAGAATCTGCCGAGTTGGAGGGTAATGTTAGAGTTAATGCTGCGTATGAAGATTCTGTTACTTATCTGAGAAATAAATTTCCAAATCTTACCATCGATGTTACAGATAATAACTATTATATTCGTTTTGCTGATAAAGAGGTAGAACGAGTGTTATTAGAAAACGGTGTAGGAAATGGAGTAGGTATTACAAAAACAGACGCTAGAAGGACAAATGTAAACCAATGGTTTCGCGAAAACAAGACAATAACTTCATTTGACGAGTTTGAATGGTTTGATAATGAAACTATAAGCAATGACGCGTTTCGTGGCTGTGAACATCTAAGAAGTATATATCTTACAAACACCAAAATAATAGGACATAGAGCGTTTTGGTGGTGTCCTAATTTGTCTGGCACACTATCTTTACCAAACCTTACATCTAACTTAGGTGAGGCTGCGTTTCGTGAAACCGGTATATAGAAAATAGAAAACCTAAACGGAACAAACTTAACAAACTGGGGAACATTTTTCAAATGTCATAACCTTACGGAGGCTAACCTTGGAGATACAATATCTATAATAGGATCCAATACATTTTTTGAATGCAGTAGCTTAGTTACTGTAAACCTTCCAGAAACAATCATAAAAATTGGAGATTACGCATTTAAATCGACTAAAATAAATAATGATATAAATTTACCAAATTTAGTTAGTTTAGGAGCTGGTGCATTTGAAAACACCCTCGTTAAAAACGTTGTAAATATTGGCACAATAACAGAGTACAACAATTGTTTTGGAAATACTCCAATTACAAAGCTAACTCTCCCAGAAACAGTTACTAGAATAGAAAGAATAGATAATTCGCAGTTAACGCAACTTAATTTCGTACCAGAGAACATTACATATTTGGGCCACGTTGCAATAAAAGCCCCTGCAGCAAAATTAGACGTATTAAATTTTTGCAACGTTACTACAGCTGTACAAAAACTGTTTAATATTACAGTAAACCAATGTTATATGCCGAAAATAACAAAAGGCGTAGAAAGCGGTTATTATAGTAACAATGCATATCACACTCCGTTTTTTTCGCTAGACAGAATTAAAAATTCATTTACGTGTGGATTATTATATTTAAAAGACATGTAGATATTATATCCTGCTACATTTACAAACAGTAAAATTACAAACTTAGTAATAAATAACGAAACTCCACCAGAGTGGAGGAATACGAATAATATATCAGATGATCAGGCGAACGATGGACAAAAGAAAAGTCTGGTATTTATTTGGAGTGATGTATCAAACATATATGTTCCGGACGCTGCGGTAATTACATATCAACAAGATGAAAATTGGTAGTCTGTTGCAGATAAGATCAAACCGTTGAGCGAATTACCAAGCGTAAATACCAAAACAGAGTATGATCAACTGAGTGATGTTAATAAGCTGAATACAATTATTAAAGAATACATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f30b2a8b80c506dff87b3b13df480472d08d1da13c5fc934ebd17daf16aebb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7990
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank