Protein

Genbank accession
QEM42588.1 [GenBank]
Protein name
baseplate protein
RBP type
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MAIETNAVVVTDLNPLYPRDRDYIYEGAAQIRLIKQTLQNTFPNVTEPVDIDSDTFKIMSEKLKFTGDAMDVGGLMIKNVTPGTGDKDVVTKGQMEAFMKNWMENKLYRIGSYYITEEDINPGDSISLGFGSWAKVTGVIMGTGVVNPDGSVPNAQRVEFQAGGTGGRVFNTIRTENVPLMTVNGSSFSLSSNTHSHNMVFGRGDASGHNSSPNWYSPGSGYSQRTENDTHSHTISGSVSLGRDDISRQPINTLPPFRAAHIWRRIS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 29244,31890 Da
isoelectric point:5,86376
aromaticity:0,08240
hydropathy:-0,43858

Domains

Domains [InterPro]
IPR053827
105–266
IPR053827
QEM42588.1
1 267
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SGF2
[NCBI] 		2601630 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEM42588.1 [NCBI]
Genbank nucleotide accession
MN148435 [NCBI]
CDS location
range 17881 -> 18684
strand +
CDS
TTGGCTATCGAAACTAATGCGGTAGTTGTTACCGATTTAAACCCACTCTATCCTAGAGATAGGGATTATATCTATGAAGGGGCGGCTCAAATCCGCCTCATTAAACAAACACTACAGAACACATTCCCCAATGTCACAGAACCAGTTGATATTGATTCTGACACTTTTAAGATTATGTCAGAGAAGCTCAAGTTTACTGGTGATGCAATGGATGTTGGTGGTCTGATGATTAAGAACGTCACTCCGGGGACTGGTGACAAAGATGTTGTTACTAAGGGTCAGATGGAAGCGTTCATGAAGAACTGGATGGAGAATAAACTCTATCGAATTGGCTCTTACTACATCACTGAAGAAGATATTAACCCCGGTGATTCTATCTCCTTAGGGTTTGGCTCTTGGGCTAAAGTGACTGGTGTTATCATGGGTACTGGTGTTGTAAACCCTGATGGTTCTGTTCCTAATGCTCAGAGAGTTGAGTTCCAAGCAGGCGGTACAGGTGGTCGTGTCTTTAATACCATTCGTACAGAGAACGTACCTTTGATGACAGTTAATGGCTCCAGCTTCTCCTTATCCAGTAACACCCACAGTCACAACATGGTGTTTGGTCGTGGGGATGCTAGCGGTCATAACAGCTCACCTAACTGGTACAGTCCGGGTAGTGGTTATAGTCAGAGAACAGAGAATGACACACACTCTCATACAATCTCTGGTAGTGTGAGTCTTGGTCGTGATGACATTTCTCGTCAACCTATTAACACTTTGCCACCATTCAGAGCGGCTCACATTTGGAGACGTATTAGCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4e7716870736d87c808c9e48d59e1f359a375b764f38288162cb2395241ed001
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7008
Evidence 0,7008
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of SGF2, a novel phage infecting Shigella flexneri Lu,H., Liu,X., Lu,M. and Liu,H. — — GenBank