Protein

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Genbank accession
WQZ00083.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MLKIVDGLKEKPHVTSNDHFGRNEGIVGISDYVLNVGRMFETELISSNELRIYDGEGMIQGCHWRILPGTYETVTLSNGTQGKKRIDYVVARYEKNSVGYEDIGISVKEGEATSGNPKPPAYITGDIRAGDTIREMVLAEIEYEGINVVEVTPKFEVLMTMAELQEKTDKLNRKLENITEYDPISGIGINYFSAIERYNNVCVSGNIWIASGSGWKTIANLPAPVAVTRFPVGYGTAVTSGQITASGELQINLKGGTNTAYEFSVSYFSK
Physico‐chemical
properties
protein length:270 AA
molecular weight: 29684,17920 Da
isoelectric point:5,08836
aromaticity:0,08889
hydropathy:-0,24963

Domains

Domains [InterPro]
DC_1002
STR
1–269
DC_1002
Coil
Unmapped
161–181
Coil
WQZ00083.1
1 270
Architecture
STR
STR 1-269 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WQZ00083.1
1 270
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,8832
Central domain 169 259 92 0,0091
C-terminal 260 270 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-259
C-terminal
260-270

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCs5676-1
[NCBI] 		3079663 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WQZ00083.1 [NCBI]
Genbank nucleotide accession
OR574845 [NCBI]
CDS location
range 12878 -> 13690
strand +
CDS
ATGCTTAAGATTGTTGATGGACTAAAAGAAAAGCCTCATGTAACAAGCAACGATCATTTCGGGAGGAATGAGGGGATTGTAGGAATATCCGACTATGTGCTGAATGTCGGAAGGATGTTCGAGACGGAACTAATAAGTTCGAACGAGTTACGAATCTATGACGGAGAGGGGATGATACAGGGATGTCATTGGAGAATCCTTCCTGGAACATACGAAACCGTAACATTAAGCAATGGCACGCAAGGAAAGAAAAGAATCGACTATGTGGTAGCAAGGTACGAGAAAAATAGCGTAGGATACGAGGACATAGGGATTAGCGTCAAGGAGGGAGAAGCAACCAGCGGAAATCCCAAACCGCCAGCGTATATAACCGGGGATATCCGGGCGGGAGATACGATCAGGGAAATGGTATTGGCAGAAATCGAATACGAAGGAATTAACGTTGTAGAAGTGACGCCGAAGTTTGAAGTCTTAATGACCATGGCAGAATTGCAGGAGAAGACGGATAAACTAAATAGAAAATTGGAAAACATCACGGAGTATGATCCTATCTCTGGTATCGGAATTAACTACTTTTCTGCCATTGAAAGATATAACAATGTATGTGTGAGCGGTAATATATGGATTGCCTCTGGATCTGGATGGAAAACTATAGCAAATCTCCCGGCTCCGGTTGCCGTTACACGATTCCCTGTCGGATATGGCACAGCCGTGACATCTGGCCAAATTACTGCATCTGGAGAATTGCAGATCAATCTTAAAGGCGGTACGAATACAGCCTATGAATTTTCAGTCAGTTACTTTTCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c01b16ed06f179cf87db2d266d380c4d4da948a88bd97979699e7f347dc7181e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Probing the 'Dark Matter' of the Human Gut Phageome: Culture Assisted Metagenomics Enables Rapid Discovery and Host-Linking for Novel Bacteriophages Fitzgerald,C.B., Shkoporov,A.N., Upadrasta,A., Khokhlova,E.V., Ross,R.P. and Hill,C. 2021 33791236 GenBank