Protein

View in Explore
Genbank accession
AZV00214.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MSILDKSRLLLFVGGTVPTTGVSAADLSAEMIARRNADNQGDVLALQTDTEASTGQLIMASIPAAQTHISLSAGQMLRFRCPFANTGPDPIISIGGMEFVIKARNGSTLAAGDLPGGQRLLGYIYWNSPDRKEIRLSESVRIPDISGLATSLASSGKAFTSRTAAVNFGQANLPGSLSLITTIEGEYLAVRSFSNAADDPLFETQPSWGVALRLPRRELLDNEVSARSSMIRPVADVSGYILASVDRNGNYVMPGWAQESDGGWPSWIYDEIWTKVEPMLPELPPSGVIREVSGEYIFSQHDANGNFIMPGWAQESDGGWPAWIYDEIWADTSSRMPDLPPSGVIREVQGSGLIFSQHDRDGNYVMPGWAQESDGGWPAWVYDEIWDNLSDRISDPGSASQEIDSPFYDKAAETTFARARSDLTKIAVIGSSTPWEMRTEIAGAFDGLVPAYGGVEVVDVTNDCKSGERSMHTAARLGAIPARLTINGGVIPASGSVLVTAVNMTGNNQLKAYEGRLNRWTDDAQTGGQIPGTLSWSAADSSLIFTRANAGAEISIGWEVSFFPTLGPTLRDRFFVIHTGWNDAPGGSTWEQIFERREAIVNYLDARDIRFSIWTDMCDMDWAPENPNRAKFASGNAAMIAKWGPLVWDMNAYFLSSRVWTDAAAIPSDILNGLAPGYAGPTTEDLAQQAAGNRCPSLSRDAGHFNALGRYLAAQEFRRHLINNNLYRTES
Physico‐chemical
properties
protein length:731 AA
molecular weight: 79392,79140 Da
isoelectric point:4,69981
aromaticity:0,09302
hydropathy:-0,22435

Domains

Domains [InterPro]
DC_1788
STR
13–240
DC_1788 DC_1040
SSF52266
STR
560–722
SSF52266
AZV00214.1
1 731
Architecture
STR
STR
STR 13-240 | STR 332-730 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Paracoccus phage vB_PbeS_Pben1
[NCBI] 		2500567 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Paracoccus bengalensis
[NCBI] 		34007 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV00214.1 [NCBI]
Genbank nucleotide accession
MK291441.1 [NCBI]
CDS location
range 31503 -> 33698
strand +
CDS
GTGAGCATCCTCGACAAGTCCAGGCTGCTGCTGTTCGTCGGCGGCACAGTTCCTACCACGGGCGTTTCGGCCGCTGACCTTTCCGCTGAAATGATCGCTCGCCGCAACGCCGACAATCAGGGCGATGTCCTCGCGCTCCAAACCGACACGGAAGCGTCCACCGGCCAGTTGATCATGGCGAGCATCCCTGCAGCGCAGACGCACATCTCGCTCTCGGCAGGCCAGATGCTGCGGTTCCGCTGCCCGTTTGCGAACACCGGGCCCGATCCGATCATCAGCATCGGCGGCATGGAGTTCGTCATCAAGGCGCGCAATGGGAGCACGTTGGCCGCTGGCGATCTGCCGGGCGGCCAACGATTGCTCGGCTATATCTACTGGAATTCGCCCGACAGGAAGGAAATCCGCCTGTCGGAGTCCGTGCGCATTCCCGACATCAGCGGCCTGGCAACTTCTCTCGCAAGCAGCGGGAAAGCCTTCACTTCGCGCACTGCCGCCGTGAACTTCGGCCAGGCCAACCTGCCCGGTTCGCTCAGTCTCATCACGACGATCGAGGGCGAGTATCTTGCGGTGCGCAGTTTCAGTAACGCTGCCGACGATCCTCTGTTCGAGACGCAACCTAGTTGGGGCGTGGCGTTGAGATTGCCGCGCCGAGAATTGCTGGACAATGAGGTTTCGGCTCGATCGTCCATGATCCGCCCTGTGGCCGACGTGAGCGGATATATTCTGGCCTCGGTGGATCGCAACGGCAACTACGTGATGCCGGGCTGGGCGCAGGAGAGCGACGGCGGCTGGCCGTCCTGGATCTACGACGAGATCTGGACCAAGGTCGAACCCATGCTTCCCGAACTACCGCCCAGCGGCGTGATCCGGGAAGTCAGCGGCGAATACATTTTCAGCCAGCATGATGCGAACGGCAACTTCATCATGCCGGGCTGGGCCCAGGAGAGCGACGGCGGCTGGCCCGCCTGGATCTATGACGAGATCTGGGCCGATACCAGCAGCCGCATGCCTGATCTGCCGCCCAGCGGGGTAATCCGGGAAGTCCAAGGGTCGGGGTTGATCTTTAGCCAGCACGACCGGGACGGTAACTATGTGATGCCGGGCTGGGCACAGGAGAGCGATGGCGGCTGGCCGGCTTGGGTCTATGACGAGATCTGGGACAATCTCAGCGATCGCATTTCCGATCCGGGCTCGGCCTCTCAAGAGATCGACTCGCCGTTCTATGACAAAGCCGCCGAAACGACCTTCGCACGGGCCAGGTCCGATCTGACGAAAATCGCCGTCATCGGATCCTCCACGCCCTGGGAAATGCGGACGGAAATCGCCGGTGCGTTCGACGGTCTTGTGCCAGCTTACGGTGGGGTCGAGGTCGTTGACGTGACGAACGACTGCAAAAGCGGAGAGCGCTCGATGCACACGGCGGCGCGCCTCGGTGCTATCCCGGCGCGCCTGACCATCAACGGGGGCGTCATTCCCGCGTCCGGGTCCGTGCTGGTTACTGCCGTCAACATGACCGGCAACAACCAGTTGAAAGCCTATGAGGGCCGGCTGAACCGCTGGACCGATGACGCGCAGACTGGCGGTCAGATCCCCGGAACACTGTCTTGGTCTGCGGCCGACAGTTCTCTGATCTTTACCCGTGCAAACGCCGGGGCGGAAATTTCCATAGGCTGGGAGGTTTCGTTCTTCCCAACGCTCGGACCCACCCTGCGGGACCGCTTCTTTGTCATCCATACCGGCTGGAACGATGCACCGGGCGGATCGACCTGGGAGCAGATCTTTGAGCGGCGCGAAGCGATCGTGAACTATCTCGACGCGCGGGACATCCGCTTTTCGATCTGGACGGACATGTGCGATATGGATTGGGCCCCTGAAAACCCGAACCGAGCAAAGTTCGCCAGCGGCAATGCCGCCATGATCGCCAAATGGGGCCCGCTGGTCTGGGACATGAACGCCTATTTCCTCAGTTCGAGGGTGTGGACCGATGCCGCGGCAATCCCGTCCGACATTCTAAACGGCCTTGCCCCCGGCTACGCTGGCCCGACCACGGAGGATCTGGCGCAACAGGCGGCCGGCAATCGCTGCCCGTCGCTGTCGCGCGACGCGGGCCACTTCAACGCGCTCGGGCGCTATCTCGCGGCGCAGGAATTCCGCCGCCATCTGATCAACAACAACCTTTATCGCACGGAGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9af7a9a8dec64a8f6208a5043ffb98f72ad44f2c3075cac5eab2128a5698f6f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6408
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Insight into the virome of Paracoccus spp. (Alphaproteobacteria) Decewicz,P., Dziewit,L., Golec,P., Kozlowska,P., Bartosik,D. and Radlinska,M. 2019-05-27 — GenBank