Protein

View in Explore
Genbank accession
WZW73203.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,51
Protein sequence
MSEFRRAFRASGLDASGQNVINVANPRVDELLDGINQGYFIDENTVQEYDPSRAHYKVDFIVEFNQRLYKNIIEITAPEPFDPQKWKKMRTDPEWEDTDSSVGANVGDFLLLTASSAITITLPETPLTGDTVTIKDGRGILSTYPCTIAAAGGLTIQSYGINGGIQSDASLSFNRPNSTIYLVYNGIAWTYQIEQQLYHTYLDDSHPSQQGGYLTTGGYFTNVGETVTYEGSVKTIAISLPLHPNVGDTIHLKDVAYLESQTTIQIGVRPTAVGQVVQDPVSGDRSAVISLDTIGGADITFIDDNGTGVWVVTIANNPHLWNYVGESSAVTLKPRTRYAIEIADAVSAMTITLPEKPVDGDWIEISHNKTAHKPVTVQVHPNFGDDDPGHGPDEYKVFLDFETYRYQKYRHYVDFVPFFVESFDISDYDSGYSFVLYYDGTRKVWSFGNIATRIDIADELHRKRPGIVPLADPTEALAHGIEYAHPEDVAKPWADQSPLKDHVITVETLDARRAAEDQVGMARIATLGVDEALEESRSGALVRYPDSAFRHDIMITPRSLNARTATETRRGVVEIATQTETRSTTNDVQVITPKKFHAAQAEENLTGVAELVKASNNINANGTVASTANMRSDRTVNGVVDTVYDKTDHLRIVTPKMLDEYRATENQPGTLWVAKSTELRVNDSTVDDAIITPKKLAAWKASSTIRGIARSATQAETNAISGTGEAWTTVFVTPETLNSRTATESRRGVAEIATQVEVDAGTDDTRIVTPLKVATWLAYDHFTSDGVAQGAGYGVSGISHTGDIWNGINLEIALATTTQRGTLETATETEAKVQQTWNGTSWDGTAAAADKIVTPLTLDRRRATETQYGLARRATNAEIDTATIGGVDNTPVYVSPKDLLRWTRTSTNSRSDETRFGVVRLATPAETFVGNSTDGSTQAYTAYLRTPYAVTPYSLHYALRNYLPLNAKADDSELLDGLDSTQFARRDINQTINGTYTFNAKNVEINAGGWLQVQNAPTGDIVKLDWFDSAPRIRVGGSGASSTATFSIQGAADFVRWQVNSSGYTTQASGATFGSTVTENESSANVDATYGTYSSPAAGTLRQKYLGINNVAKAAEKWVTARTVTFTGDLTGNFTIDGSGNVSTNVQVNDNSHNHSGENITSGTISNDRLIKSSRTNPGIVQVTSDVRTADPVNASDPHQALSAGAGKTLSERIDLFTPDGGTGDNVKYRDYIQVGSVRMSTNNQGVLEFTFGHAI
Physico‐chemical
properties
protein length:1256 AA
molecular weight: 136568,08860 Da
isoelectric point:4,98662
aromaticity:0,08201
hydropathy:-0,37850

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage TCU-VP04-AIR2
[NCBI] 		3141803 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZW73203.1 [NCBI]
Genbank nucleotide accession
PP712903 [NCBI]
CDS location
range 11729 -> 15499
strand +
CDS
ATGTCGGAATTCCGCAGAGCATTTCGTGCGTCAGGTCTTGATGCAAGTGGTCAAAATGTAATTAACGTAGCAAACCCACGAGTAGATGAATTGCTCGACGGTATTAACCAAGGCTACTTCATTGATGAAAACACTGTTCAAGAGTATGATCCATCACGAGCGCACTACAAAGTAGATTTCATCGTTGAATTTAACCAACGTCTCTACAAAAACATCATTGAAATCACCGCGCCCGAACCATTTGACCCACAGAAGTGGAAGAAGATGCGTACCGACCCAGAGTGGGAAGATACAGATTCTTCAGTTGGTGCAAACGTAGGTGACTTCTTATTGTTGACAGCTAGTTCAGCAATTACAATTACACTACCAGAAACGCCATTAACCGGCGATACTGTTACAATCAAAGATGGGCGCGGTATTCTATCGACTTACCCATGTACGATTGCAGCAGCAGGCGGTCTAACTATCCAGTCGTATGGCATTAATGGCGGAATTCAATCTGATGCAAGTCTATCATTCAATCGCCCGAACAGTACAATTTATCTTGTGTACAACGGGATTGCATGGACGTATCAAATTGAACAGCAACTATACCACACGTACCTAGATGACAGCCATCCAAGTCAACAAGGTGGCTATCTAACTACTGGTGGTTACTTTACGAACGTAGGTGAAACTGTCACATACGAAGGTTCAGTAAAAACAATCGCGATCTCTCTACCGCTACACCCGAACGTGGGCGATACAATTCATCTTAAAGATGTTGCATATCTTGAAAGTCAAACGACAATTCAAATCGGCGTTCGACCAACAGCAGTAGGTCAGGTTGTTCAAGACCCTGTTTCAGGTGATCGCAGTGCAGTAATCAGCTTAGACACAATAGGTGGAGCTGACATCACGTTTATTGATGACAACGGCACTGGCGTTTGGGTTGTCACTATTGCGAACAACCCGCATTTGTGGAACTATGTGGGTGAATCAAGTGCAGTTACGCTAAAACCACGTACTCGTTACGCGATTGAAATCGCTGATGCAGTTAGTGCAATGACAATCACGCTACCAGAAAAACCAGTTGATGGTGACTGGATCGAGATTTCACACAACAAGACTGCGCACAAACCTGTAACAGTTCAAGTTCACCCGAATTTTGGCGATGATGACCCAGGTCACGGCCCAGATGAATACAAAGTATTCTTGGACTTCGAGACTTACCGTTATCAAAAATATCGTCATTACGTCGATTTCGTTCCATTCTTCGTAGAATCGTTCGATATTAGCGACTATGACAGCGGTTACTCATTCGTACTGTACTATGACGGAACTCGTAAAGTATGGTCATTCGGTAACATTGCAACTCGTATCGACATTGCAGATGAACTTCACCGCAAACGTCCGGGTATCGTGCCACTAGCTGACCCAACTGAGGCTCTAGCTCACGGCATTGAATATGCACATCCAGAAGATGTTGCAAAACCATGGGCTGATCAGAGTCCGTTGAAAGATCACGTAATTACCGTTGAAACTTTAGATGCACGTCGTGCAGCCGAAGATCAAGTCGGTATGGCTCGTATCGCGACTCTTGGTGTTGATGAAGCACTTGAAGAATCACGTTCTGGCGCGTTAGTTCGCTACCCAGATAGTGCATTCCGTCATGACATCATGATCACGCCGAGAAGCTTGAACGCTCGTACAGCAACTGAAACACGTCGCGGTGTTGTTGAAATTGCGACACAGACTGAAACACGTAGCACAACTAACGATGTGCAAGTGATCACGCCTAAGAAGTTTCATGCTGCGCAAGCGGAAGAGAATTTAACAGGCGTTGCAGAACTTGTCAAGGCGTCAAACAACATTAACGCTAATGGCACAGTAGCTTCTACTGCAAATATGCGTTCTGATAGAACAGTTAACGGTGTTGTTGATACTGTATATGACAAAACTGATCATCTTCGCATTGTAACTCCGAAAATGCTTGATGAATATCGAGCTACTGAGAACCAACCGGGTACTCTATGGGTTGCTAAGAGCACTGAGCTTCGTGTAAACGACTCAACAGTTGATGATGCAATCATCACGCCTAAGAAATTAGCAGCGTGGAAAGCAAGCTCTACAATTCGCGGTATTGCACGTTCGGCAACCCAAGCTGAAACAAACGCAATCAGCGGAACAGGTGAAGCATGGACAACTGTTTTCGTTACACCCGAGACATTAAACAGTCGTACAGCGACTGAATCTCGTCGAGGCGTAGCTGAGATTGCAACTCAAGTAGAAGTTGACGCAGGGACTGATGATACACGTATCGTTACGCCTCTGAAAGTTGCAACATGGCTTGCATACGATCACTTTACTAGTGATGGGGTTGCTCAAGGCGCCGGTTACGGCGTATCGGGTATCTCACATACAGGTGACATTTGGAACGGCATCAATCTAGAAATCGCACTTGCAACAACAACGCAACGCGGTACTCTAGAAACAGCGACTGAAACAGAAGCTAAAGTTCAGCAAACGTGGAACGGTACGTCTTGGGACGGCACAGCAGCAGCAGCCGATAAAATTGTCACACCATTGACACTTGATCGCCGTCGTGCCACTGAAACACAATACGGTCTTGCACGTCGTGCAACAAATGCTGAAATTGACACTGCGACAATCGGTGGCGTTGATAACACACCAGTTTACGTATCGCCAAAAGACTTGCTTCGTTGGACTCGTACTTCTACGAATTCACGTTCTGATGAAACACGCTTCGGTGTTGTTCGTCTAGCTACGCCAGCAGAAACATTCGTTGGTAACAGCACTGACGGTTCAACTCAAGCATATACAGCTTACTTGCGTACACCGTATGCAGTTACGCCGTACAGCTTGCATTATGCATTGCGCAACTACTTGCCATTGAATGCAAAGGCTGATGACTCAGAATTGCTAGATGGTTTAGACAGTACTCAGTTTGCTCGTCGTGATATTAATCAAACGATCAACGGAACTTATACGTTCAATGCTAAAAACGTCGAAATTAATGCAGGTGGCTGGCTTCAAGTACAGAATGCACCGACTGGTGATATTGTTAAGCTAGATTGGTTTGATTCTGCTCCCCGCATTCGCGTCGGGGGAAGCGGTGCTTCATCAACTGCTACGTTCTCGATTCAAGGCGCGGCTGATTTTGTTCGCTGGCAAGTTAATTCGTCTGGTTATACTACACAAGCAAGTGGTGCGACTTTCGGTAGCACAGTTACTGAAAACGAATCAAGCGCAAACGTTGATGCAACATACGGGACTTATTCAAGCCCAGCAGCAGGTACACTTCGTCAGAAGTACTTGGGTATCAATAACGTAGCAAAAGCGGCTGAGAAGTGGGTTACAGCGCGTACAGTGACGTTCACTGGCGACTTGACTGGTAACTTCACAATTGACGGAAGCGGAAACGTTTCTACAAACGTGCAAGTTAACGACAATAGTCACAATCACTCAGGTGAGAACATCACGAGCGGTACGATCTCGAACGACCGACTAATCAAGTCAAGTCGTACGAACCCGGGTATTGTTCAAGTAACAAGTGATGTACGTACAGCAGACCCAGTGAATGCTTCAGACCCACACCAAGCTCTATCGGCTGGTGCAGGTAAGACTCTATCTGAGCGAATTGACTTGTTCACGCCAGATGGCGGTACTGGTGACAACGTTAAATACAGAGACTACATTCAAGTTGGCTCTGTAAGAATGTCAACAAACAATCAAGGCGTGCTGGAGTTCACATTCGGTCACGCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c313129a5546d1f41e25512a3278901424babb924105bdc7a7a08591be1c884
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5336
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50