Protein

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Genbank accession
GENB_e1d5e5d219a4 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,59
Protein sequence
MAKAGGTYPDILQGVSQKPAHRRRPGQTHEQINVLSDPVNGLVRRRGTRFAASQAVVTSAELRNMDVFDFMQEGKEYALLYRRDASTLGSESFAFLYNKTDETFIPLVYENSTWVHTLVSGGASSLAAIGSYVYIAGNTTIPSATSTNVWQEQTNIQRLAAWVRSGKYNTTYTVNLTRADNTVLTVTFKTVTASYPGTLDTTDIPFYLPGGTEPDPAYQKHVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEQLSDLLVDAGVASTYIKGGIVIEDDQFKDITVDDEGDGTTFYAAGQEITDATYAVKFHWHGKIIRVRPSGAGADESYYLRAELENGETSGYGSVDWYEAPGVECTIDNLVSQLYIYNGVGYIARNGAGLTSLAPGSGEHPAYGARVAGDGLTSPIPWFIDKPITMLSVFQDRLVIGAQNYVNAPRSADYLNFWRGSAVTIEDSDPIEIFAHGSEGDVLRHATLYNGNLVIFGDRQQYGISGDSVFSPKSPLIKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSNELDSWLSGTPLQITPLTAPNLVMFRTRGHPQDFYLYRYEDNKNNGQRVVDSWSKFQYHPALGEIIGVSSYKKNGLVFTARGSLVVCDVFDPKGEPDSHACLDSWASFGTPTGVQTASASIAVNSTSPYFLLGCTYAQASDFLSQFDDLNAGALEYGVVSEALVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVENTAGMLAAVTTRNNNMTTTDFEGRILGDSDNLIARQPVYRGQLNISVGREVHECTYEIRSKDWLPLRVTGLSWTGQTFNNVRRVS
Physico‐chemical
properties
protein length:834 AA
molecular weight: 91378,31160 Da
isoelectric point:4,96178
aromaticity:0,10312
hydropathy:-0,31583

Domains

Domains [InterPro]
IPR058003
TTP
1–636
IPR058003 IPR058003
DC_0058
STR
1–834
DC_0058
GENB_e1d5e5d219a4
1 834
Architecture
STR
STR 1-834
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_e1d5e5d219a4
1 834
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,8682
Central domain 188 389 203 0,3243
C-terminal 390 834 444 0,3539
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-389
C-terminal
390-834

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage NUT4
[NCBI] 		3038186 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OQ446484.1_CDS_[15665..18169] [NCBI]
Genbank nucleotide accession
OQ446484.1 [NCBI]
CDS location
range 15665 -> 18169
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
83f0403ab5e1c44348a4988e2ceff00e99b4ad7b8c7b3cdf00e87f79c6a052f6

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,8409
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
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Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50