Protein

View in Explore
Genbank accession
QDH83731.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNSQNPFPSGDSCCGPNNDMTVDQLLGNAYQVVKFVAMRMPYIKTLSDNIDDLIALAGSLEGLNDLAAKLPELMSLQAELQKLIVLYDNLSKLVLVADNMTQILTVHDNLPQIQTIVDNLTQIQTVVSNIANIVTVANNIAAVNNVHNNMSALLNVNTNMAAVNNVSTNMTDVRAVATNMPQVSAVGSNIAEILAVYSKLDELTELATELDATLAKFTDLAAPSGGQMVGTPIATTMADAVIGVPTMAALRALPVPVLAAGKTVTISLLGFHEVGDGGGGQFYWKGNSNQVDDGGTVISPDGNPATGRWLRVRDHGYANVRWFGAKGNGVAESAVAFQKALDSGIPQIEVPSDSEFVWAGNGPTIKSKTYLFSRGGVIRQPEAHIEATSTVGNEFAALRMDLGFSDITIDGLDIRGPFFEGPVTPAYRSIGISVSGRYDQYYYNNPNYPANPDIPVTGTSKKLTLLNLKIDGFGQSGVIVDQVDDFKASFISISNCCRDGIRTYGTYDGLVTHVDVATLGPGMPLEGTAPNNNMYGVEFTRIYHSPDADGSVDVYRPSRRCTLANSKFRNIPGWKGAGTHGGTDISFVMNEFDDCHIGIGIDKGGYNLADGFAPPRRISLIGNRFDATAGVAYGNRAAIACYAHDDTEDNIGEDLYLSGNRAYGPWGEDTRDGAIVVSNYRNVQVLNSEINGALRSGINFQNTVVDFRIAGGVLSNIQKTSSNVCVGVNCQGTKMRGMVDDLVFAQPVGDTMTALSSASQLAGYAVELGRNLKFSGSITKVNSQGTFFGQDSPFFKRTLAWVSYNMAGGTVPTVQSERGVASLSLIATGQVRVTMREPATTATTYVVNAVSRSTTPIMFSVVSVSATEFDILTFNQAGAAANSAMQVEVVGY
Physico‐chemical
properties
protein length:892 AA
molecular weight: 94931,81970 Da
isoelectric point:4,91409
aromaticity:0,07623
hydropathy:-0,02534

Domains

Domains [InterPro]
DC_0098
STR
45–890
DC_0098
Coil
Unmapped
73–93
Coil IPR011050
IPR012334
STR
318–736
IPR012334
QDH83731.1
1 892
Architecture
STR
STR 45-890 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH83731.1
1 892
Domain Start End Length (AA) Confidence
N-terminal 1 332 332 0,9832
Central domain 333 785 454 0,9921
C-terminal 786 892 106 0,9774
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-332
Central
333-785
C-terminal
786-892

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AxyP_19-32_Axy04
[NCBI] 		2591039 Uroviricota > Caudoviricetes > Schitoviridae > Dongdastvirus > Dongdastvirus Axy04
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH83731.1 [NCBI]
Genbank nucleotide accession
MK962626.1 [NCBI]
CDS location
range 64933 -> 67611
strand -
CDS
ATGAACTCCCAAAATCCGTTCCCCAGTGGTGATAGCTGCTGCGGTCCGAACAATGACATGACGGTGGATCAACTGTTGGGCAACGCCTATCAGGTGGTGAAGTTTGTCGCCATGCGTATGCCGTATATCAAGACTCTGAGCGACAACATCGATGATCTCATCGCCTTGGCTGGTTCGCTGGAAGGTCTGAATGATCTGGCAGCCAAGCTGCCGGAACTGATGTCTCTTCAGGCCGAGCTTCAGAAACTGATCGTGCTGTACGACAACCTGTCCAAGCTGGTTCTGGTTGCTGACAACATGACTCAGATTCTGACGGTACATGACAACCTGCCTCAGATTCAGACCATCGTGGACAATCTGACGCAGATTCAAACGGTGGTGAGCAACATCGCCAACATCGTCACTGTGGCCAACAACATTGCCGCTGTGAACAACGTTCACAACAACATGTCGGCACTGTTGAACGTCAACACCAATATGGCTGCGGTGAACAACGTCTCTACGAACATGACGGACGTTCGCGCTGTGGCTACCAATATGCCGCAGGTCTCTGCTGTTGGTTCCAACATTGCAGAAATTTTGGCTGTTTACTCAAAGCTGGATGAATTGACGGAGCTGGCTACTGAACTGGATGCAACTCTAGCAAAGTTCACGGATTTGGCTGCTCCGTCTGGTGGTCAGATGGTTGGTACCCCCATCGCTACGACTATGGCAGATGCAGTGATCGGTGTTCCGACTATGGCAGCACTTCGTGCTTTGCCTGTTCCTGTACTTGCTGCGGGCAAGACGGTAACGATTTCCCTGCTCGGTTTTCATGAAGTCGGTGATGGTGGCGGGGGCCAGTTCTACTGGAAGGGTAACAGCAACCAGGTTGATGACGGTGGCACGGTAATCTCGCCTGATGGCAATCCGGCAACGGGCCGTTGGCTCCGTGTTCGTGATCATGGATACGCCAACGTTCGATGGTTCGGTGCCAAGGGCAATGGTGTGGCGGAATCCGCTGTGGCTTTCCAGAAGGCACTGGACAGTGGCATTCCCCAGATCGAAGTGCCGTCAGATTCCGAATTCGTATGGGCAGGTAATGGTCCTACCATCAAGAGCAAGACGTACCTGTTCTCGCGTGGTGGTGTTATCCGTCAACCGGAAGCGCATATCGAGGCTACCTCTACTGTGGGCAATGAGTTCGCTGCTCTGCGTATGGACTTGGGTTTCTCGGACATTACCATTGATGGATTGGATATTCGCGGACCTTTTTTCGAGGGTCCGGTTACTCCTGCGTATCGCAGCATTGGTATTTCGGTGTCTGGACGCTACGATCAATACTACTACAACAATCCGAACTACCCGGCCAATCCCGATATTCCGGTGACGGGCACTTCCAAAAAATTGACTCTTCTGAATCTGAAGATTGATGGCTTCGGGCAGTCGGGCGTGATCGTGGACCAAGTGGATGACTTCAAGGCGTCGTTCATCAGCATTTCAAACTGCTGCCGTGATGGAATCCGAACCTACGGCACCTATGACGGTCTGGTGACTCATGTTGACGTGGCCACCTTGGGACCGGGCATGCCGTTGGAGGGTACTGCCCCCAACAACAACATGTACGGGGTGGAGTTCACTCGCATCTATCACAGTCCTGATGCAGATGGTTCCGTGGATGTTTATCGTCCCAGTCGCCGCTGCACATTGGCGAACAGTAAGTTCCGTAACATCCCTGGCTGGAAGGGCGCCGGGACCCATGGAGGAACTGACATCTCGTTCGTTATGAACGAGTTTGATGACTGCCATATCGGTATTGGTATCGACAAGGGTGGCTACAACTTGGCAGATGGTTTTGCCCCGCCTCGTCGTATCAGCCTAATTGGCAACCGCTTCGATGCGACCGCTGGTGTTGCTTACGGCAATCGTGCGGCTATCGCTTGTTATGCACATGACGATACGGAAGACAATATCGGGGAAGACCTGTACCTGTCGGGTAACCGTGCATATGGTCCTTGGGGCGAAGATACCCGTGATGGTGCCATTGTGGTAAGTAACTACCGTAATGTGCAGGTTCTGAATTCTGAAATTAATGGCGCACTTCGTTCTGGCATCAATTTCCAAAACACAGTCGTGGATTTCCGTATTGCAGGGGGTGTCCTCAGCAATATCCAAAAGACTTCCTCTAATGTGTGTGTTGGGGTCAACTGCCAGGGAACCAAGATGCGCGGTATGGTAGATGATCTGGTATTTGCCCAACCTGTTGGCGACACGATGACTGCTTTGTCTTCTGCCTCTCAGCTTGCTGGATATGCAGTAGAGCTGGGGCGGAATCTGAAGTTCTCGGGAAGCATTACCAAAGTGAATTCCCAAGGTACGTTTTTCGGTCAAGACAGCCCGTTCTTCAAGCGAACGTTGGCTTGGGTTAGCTATAACATGGCTGGAGGCACTGTTCCCACTGTGCAATCAGAACGAGGCGTGGCATCCTTGTCCCTGATTGCGACAGGGCAGGTACGGGTCACTATGCGAGAACCGGCGACCACTGCGACTACCTATGTGGTCAATGCTGTTTCCCGCAGCACGACCCCTATCATGTTCTCTGTTGTTTCTGTTAGCGCCACCGAGTTTGACATCCTGACTTTTAACCAAGCAGGTGCGGCGGCTAACTCTGCGATGCAAGTAGAGGTTGTCGGGTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
89f3c807ddac2011c8ece5bc8fb22e3f281e2b1470c1f66c03e8935c7535228b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of sixteen phages from Abidjan, cote d'Ivoire, isolated on a single strain of Achromobacter xylosoxidans Essoh,C., Vernadet,J.-P., Vergnaud,G. and Pourcel,C. 2020-01-02 — GenBank