Protein

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Genbank accession
CAM0019825.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALLAWYPLHKDTNDWSGFENHAHGANSTSGNGVIGGNVLESTLHIDKNEQLDQVLSGDEATLCFWVQGDSDGSDWADIVSYQPSTGAATVRFERGNIDDDVNQYDYWCNWFNGATSGNGVVTTNYRVGPIADWHHVTIRRTPTRVSIYINAEFDRMFNVSNDISPPTGAVTLIAHTSARVRLQDVRFYDNAISDREMKDIALGTVAKWNMNGANEFLPRNSTRNPDFLPGAAYVNGTWDTELNKDAILCESWSSGYNGGVPDPEIGYHAKWVNIDGKAVMRHINDNQRFGYGDRWMGISCGHGNLVDYGLEVGDRITVSWTQRSTHTGATFNVGFYTRRADNSTKWESGKITHTQNVAGEWERKSYTTTVGSDTDVNRSITIYFYGHYSVEGATMEAKDIQFECHRDVANPYRKFSADDVIVSDMTGLENNALLEYDYAPSYVENDTERGSGHFHFPSSGRTGWNDIRRHIRTTANHMSRQVSVAFWARTTQGDNRNPFMKYDDGIYTEGSQVSGGAILLCLEGNRFRMHGWGSSDPICSTHTNDGEWHHYVWTFDYDTRLANMFVDGVREVANSLDSEGVIQPLENYVWTIGANMHPYSSTTGATFNGDITEVSIHGKALSVDEVSRLYNVKASVDNLGNAHAVEFQEGWDHDGENTLMIRSSSSGNTGTYLNGVKVGNIDSWRGINFCIFDQTMTLRAFGGLDTYSGTTAQYYEFDGEVIVASANDVPDSAQAAANHLKDAIDRMEDGWLMTAARCDASTTQDGTLREYFERYFGVTENHAIASRGTWGFIGIKNGELLTQFSDGRRYDASSGSISYYTKEYAATGGFHKPQVTKDGVMHAGEIVESYYRPGLLDYSTWTLETTGSQPGFDVYGSNAIIAVAKNPWGEDDVMWRGYKEDSTTQSGGFYAHDVNMNPAKHHRFTLWMRRSVSGNGNWYVGCNGSRTNNLSGSANTNPYFDYGTNYFDNEWVLLVAYVYANGTTDNDTYIDHGIYDVDGNRLSSINTNYAMGDGATENYMRAFMYQSSATDTEQFFYRPRIDVMDGSQPTLEELLSGSESMPLLPSYGEDVDYNGNVSFGANGDAMFNEFNEV
Physico‐chemical
properties
protein length:1094 AA
molecular weight: 121964,75220 Da
isoelectric point:4,80360
aromaticity:0,12157
hydropathy:-0,56152

Domains

Domains [InterPro]
DC_2221
ATT
1–43
DC_2221 G3DSA:2.60.120.200 DC_0004 G3DSA:2.60.120.200
IPR013320
STR
54–207
IPR013320 IPR013320
PF13385
LEC
54–197
PF13385 PF13385
CAM0019825.1
1 1094
Architecture
ATT
STR
STR
ATT 1-43 | STR 44-229 | STR 285-650 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAM0019825.1
1 1094
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,0007
Central domain 12 246 236 0,5264
C-terminal 247 1094 847 0,5545
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-246
C-terminal
247-1094

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D525
[NCBI] 		3105285 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAM0019825.1 [NCBI]
Genbank nucleotide accession
OZ195947 [NCBI]
CDS location
range 199646 -> 202930
strand -
CDS
ATGGCATTATTAGCATGGTACCCGCTCCACAAAGACACCAATGACTGGAGTGGGTTTGAGAATCACGCACATGGTGCAAATTCGACAAGCGGAAATGGTGTGATTGGGGGCAATGTACTTGAGAGTACATTGCACATCGATAAAAATGAACAACTTGATCAAGTTCTCTCAGGCGACGAGGCTACATTGTGTTTCTGGGTGCAAGGTGATTCTGATGGGTCTGATTGGGCTGACATTGTTAGCTATCAACCATCGACTGGCGCAGCAACGGTGCGTTTTGAGCGTGGTAATATTGATGATGATGTCAATCAATATGATTACTGGTGTAACTGGTTCAATGGCGCAACTAGTGGTAATGGGGTTGTTACAACCAATTATCGGGTCGGGCCTATTGCTGATTGGCATCACGTAACAATACGCAGAACTCCGACGAGAGTTAGCATATACATCAACGCAGAGTTTGATCGTATGTTTAACGTATCGAATGATATATCACCACCTACTGGGGCAGTGACATTGATTGCTCACACGAGTGCTCGTGTGCGATTGCAAGATGTTCGCTTTTACGACAACGCGATTTCAGATCGTGAAATGAAAGACATCGCACTTGGGACAGTTGCAAAGTGGAACATGAACGGGGCGAACGAGTTTCTACCGCGTAACAGCACGCGTAACCCTGATTTTCTACCGGGTGCTGCGTACGTCAACGGAACATGGGACACTGAACTGAACAAAGACGCGATCTTGTGTGAAAGTTGGTCAAGTGGCTACAATGGCGGCGTCCCTGATCCGGAAATTGGCTATCACGCGAAATGGGTGAATATTGACGGTAAAGCTGTAATGCGCCATATCAATGATAATCAGCGTTTTGGTTACGGGGATCGTTGGATGGGTATCTCATGCGGTCATGGGAATTTAGTTGATTATGGTCTTGAAGTTGGCGACCGAATCACAGTCTCATGGACGCAGCGTTCAACTCACACTGGCGCGACGTTCAACGTTGGATTTTACACGCGTCGAGCTGATAACTCTACAAAGTGGGAATCTGGTAAGATAACACACACGCAAAACGTTGCAGGTGAATGGGAACGCAAATCGTATACGACGACTGTTGGCTCTGACACTGATGTGAATCGTTCTATTACGATTTACTTCTATGGTCATTACTCAGTCGAGGGCGCGACGATGGAAGCGAAAGACATTCAATTTGAATGCCATCGTGACGTGGCAAACCCATATCGCAAATTCAGTGCTGACGATGTTATCGTCTCTGATATGACTGGTCTAGAGAACAATGCTCTTCTTGAATACGACTATGCGCCATCTTATGTTGAGAACGACACTGAACGCGGTTCTGGTCATTTTCACTTCCCGTCTTCGGGACGTACTGGTTGGAATGATATTCGAAGACATATTCGAACAACTGCGAATCACATGTCGCGTCAAGTATCAGTTGCATTCTGGGCTAGAACAACACAAGGTGATAATCGTAACCCATTCATGAAATACGATGATGGCATTTATACTGAGGGAAGTCAAGTCTCTGGTGGTGCTATTTTGCTGTGTCTTGAAGGCAATCGATTTAGAATGCACGGTTGGGGTTCAAGTGACCCGATTTGTTCGACGCATACTAATGATGGCGAATGGCATCACTATGTATGGACGTTTGATTACGATACGCGATTAGCTAACATGTTTGTCGATGGTGTGCGTGAAGTTGCAAACTCGCTTGATAGCGAAGGCGTGATTCAGCCGCTAGAAAACTACGTATGGACTATTGGCGCGAATATGCACCCTTATTCTAGTACGACTGGTGCTACGTTCAATGGCGATATTACTGAAGTTTCGATTCATGGTAAAGCACTGTCAGTCGATGAAGTTTCTCGTTTGTACAACGTGAAGGCGTCTGTTGATAATCTAGGCAATGCACATGCAGTAGAGTTTCAAGAGGGTTGGGACCATGACGGTGAAAATACGCTGATGATTCGAAGCAGCTCAAGCGGCAATACTGGCACGTATTTGAATGGTGTTAAGGTGGGTAATATTGACTCTTGGCGCGGTATTAACTTCTGTATATTCGATCAAACAATGACGCTTCGTGCGTTCGGTGGTCTTGATACGTATTCTGGAACAACGGCTCAATATTACGAGTTCGACGGTGAAGTGATTGTCGCTTCGGCAAACGATGTTCCTGATTCAGCACAAGCCGCTGCGAATCATCTAAAAGACGCGATTGATCGAATGGAAGATGGTTGGCTGATGACTGCTGCTCGATGTGATGCAAGTACGACGCAAGATGGTACACTGCGTGAATATTTCGAACGATACTTCGGGGTCACTGAGAATCATGCGATTGCGTCTCGCGGTACATGGGGTTTCATCGGCATCAAGAATGGCGAGTTGTTGACTCAGTTCTCTGATGGACGTCGTTATGATGCTTCAAGTGGTTCAATTTCGTACTACACGAAAGAATACGCTGCGACTGGTGGATTTCATAAGCCGCAAGTTACTAAAGATGGTGTTATGCACGCAGGTGAGATAGTCGAGAGCTATTATCGTCCGGGATTGCTTGACTATTCAACATGGACATTAGAAACCACAGGAAGTCAGCCGGGATTTGATGTGTATGGCTCTAATGCGATCATTGCAGTTGCGAAAAACCCATGGGGTGAAGACGACGTGATGTGGCGCGGTTATAAAGAAGATTCGACGACTCAATCAGGTGGATTTTATGCACATGACGTTAATATGAACCCTGCGAAGCATCATAGATTTACTCTGTGGATGCGACGTAGCGTGAGTGGTAACGGCAACTGGTATGTTGGGTGTAATGGGTCAAGGACAAATAACTTGAGTGGATCTGCAAACACGAATCCATACTTTGATTACGGTACAAATTACTTTGACAATGAATGGGTGCTTCTTGTTGCTTACGTATATGCAAACGGAACGACTGACAACGACACGTATATTGATCATGGCATATACGATGTTGACGGGAATCGTTTGAGTAGCATTAATACGAACTACGCAATGGGTGACGGTGCAACTGAAAACTACATGCGTGCGTTTATGTATCAAAGCTCTGCTACTGACACTGAACAGTTCTTTTATAGACCCCGAATCGACGTAATGGACGGCAGTCAACCGACACTAGAAGAGTTGCTTTCTGGCTCTGAGTCAATGCCCCTGCTTCCGAGTTACGGTGAAGATGTTGACTATAATGGGAATGTGAGCTTCGGTGCAAATGGTGACGCTATGTTCAATGAGTTCAATGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d5b2f275df4697cb3d9717748609feb83f7d598cbeb4016af77b5140642a480
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2684
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50