Protein

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UniProt accession
A0A8S5UID5 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MYFQITNAARDALASNPSIRPTSYKLGTGTGYVPTASDTDIHGTLVSTGLLSPGDVINGNVLRYSILLPKDLTFLQQFGEVGLYTSTNMLFALAVADVPVTKDNSYAMRIDAYLSSVDANYEMWLDVAETSNAFHMGTLQSVDMLPSASDALPSAYIVKQGLIESFRAYTSGNGLWGFDEYASDGGTYPVTQPSVLSVTVNGATYTGPRVLDVNNPPIIEFVTGYLFSLCRKVTSIIDSGSSVTLNWDTPLIQAPVAGDTVVVFNRVPKSITAGPGITITRGANGQMVISAAQGSVSVWRNGIGAPANTVGNNGDYYLDDGNGNVYAKSAGVYSIVANIAGPQGVAGAAGAAGATGPQGPKGDAGIAGAPGANGNTIWNGTGAPSNTLGAPGDFYLQTDTSVLWGPKTTAWPSSGVPLQAPMKTYAVSLFVEGTTNVPNEVLMVHCAAAAFTIPVSLPGSNVKALSPAANNSVFIIKKNGTQIGVATFAIGSTTALLGSSVPVSFAVGDILEVDGPNTPDPSLANIGFTIVGTLN
Physico‐chemical
properties
protein length:535 AA
molecular weight: 55005,17310 Da
isoelectric point:4,57698
aromaticity:0,08224
hydropathy:0,15626

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctu2j3
[NCBI] 		2825197 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF94158.1 [NCBI]
Genbank nucleotide accession
BK016090 [NCBI]
CDS location
range 175812 -> 177419
strand -
CDS
ATGTATTTCCAGATAACGAATGCGGCACGTGATGCGCTGGCATCGAATCCCTCAATCAGACCTACTAGCTACAAGCTGGGCACTGGTACTGGATATGTGCCTACAGCCAGTGATACCGACATACACGGAACTCTGGTATCAACAGGACTCCTTAGTCCCGGCGACGTGATAAACGGTAACGTGCTTCGGTACTCCATTCTTCTTCCTAAGGATTTGACATTCCTTCAGCAGTTCGGAGAAGTTGGGCTGTACACCAGCACTAACATGCTGTTTGCACTAGCTGTGGCGGATGTGCCGGTCACTAAGGACAACTCGTATGCTATGCGTATAGACGCGTACCTGTCTTCGGTTGACGCAAACTACGAGATGTGGCTCGATGTGGCTGAGACCAGCAACGCATTCCACATGGGTACGCTTCAGTCTGTTGACATGCTGCCCAGCGCCAGTGACGCATTGCCGTCCGCGTATATCGTTAAGCAGGGGCTCATTGAATCATTCCGCGCCTATACCTCGGGGAACGGCCTATGGGGTTTTGATGAGTACGCGTCAGATGGCGGCACGTACCCAGTTACGCAGCCGAGTGTCTTGTCAGTCACGGTGAACGGTGCTACCTATACGGGACCACGCGTTCTAGACGTGAACAACCCGCCGATCATAGAGTTTGTGACCGGCTATTTGTTTAGTCTGTGCCGTAAGGTGACCAGTATCATTGATTCGGGTTCCTCAGTAACTCTGAATTGGGATACACCGTTGATTCAGGCACCTGTGGCGGGTGACACTGTAGTTGTGTTCAACCGAGTCCCGAAATCTATAACAGCGGGCCCGGGCATCACCATCACGCGGGGGGCTAATGGTCAGATGGTGATATCTGCCGCTCAGGGCAGTGTGAGTGTGTGGCGCAACGGTATAGGGGCACCTGCCAACACAGTAGGAAATAATGGGGATTACTATCTAGATGACGGTAACGGAAACGTGTACGCGAAGTCGGCCGGAGTCTATTCGATAGTCGCTAACATAGCAGGTCCCCAAGGCGTCGCTGGAGCCGCAGGTGCCGCGGGCGCTACGGGTCCGCAAGGTCCTAAAGGTGATGCTGGTATAGCGGGTGCGCCGGGCGCGAATGGCAACACTATATGGAACGGGACTGGTGCTCCGTCAAACACACTCGGCGCACCCGGCGACTTCTATTTGCAGACCGATACTTCGGTGCTATGGGGTCCTAAAACAACGGCATGGCCATCGTCTGGTGTACCGCTACAGGCACCAATGAAGACGTACGCAGTGTCGCTATTTGTTGAAGGCACAACAAACGTGCCCAATGAAGTTCTTATGGTGCACTGTGCAGCTGCCGCATTCACTATACCTGTAAGCCTTCCGGGTTCTAATGTCAAGGCCCTGAGTCCAGCTGCCAATAACTCGGTGTTCATCATCAAGAAGAACGGGACTCAGATAGGGGTAGCCACATTTGCCATTGGGTCTACTACTGCACTTCTTGGATCATCGGTTCCGGTGTCCTTTGCCGTGGGTGATATTCTAGAAGTGGACGGGCCAAACACACCCGACCCCTCGCTAGCTAACATCGGATTCACCATTGTGGGTACGCTGAATTGA
Genbank protein accession
DAF94253.1 [NCBI]
Genbank nucleotide accession
BK016090 [NCBI]
CDS location
range 256060 -> 257667
strand +
CDS
ATGTATTTCCAGATAACGAATGCGGCACGTGATGCGCTGGCATCGAATCCCTCAATCAGACCTACTAGCTACAAGCTGGGCACTGGTACTGGATATGTGCCTACAGCCAGTGATACCGACATACACGGAACTCTGGTATCAACAGGACTCCTTAGTCCCGGCGACGTGATAAACGGTAACGTGCTTCGGTACTCCATTCTTCTTCCTAAGGATTTGACATTCCTTCAGCAGTTCGGAGAAGTTGGGCTGTACACCAGCACTAACATGCTGTTTGCACTAGCTGTGGCGGATGTGCCGGTCACTAAGGACAACTCGTATGCTATGCGTATAGACGCGTACCTGTCTTCGGTTGACGCAAACTACGAGATGTGGCTCGATGTGGCTGAGACCAGCAACGCATTCCACATGGGTACGCTTCAGTCTGTTGACATGCTGCCCAGCGCCAGTGACGCATTGCCGTCCGCGTATATCGTTAAGCAGGGGCTCATTGAATCATTCCGCGCCTATACCTCGGGGAACGGCCTATGGGGTTTTGATGAGTACGCGTCAGATGGCGGCACGTACCCAGTTACGCAGCCGAGTGTCTTGTCAGTCACGGTGAACGGTGCTACCTATACGGGACCACGCGTTCTAGACGTGAACAACCCGCCGATCATAGAGTTTGTGACCGGCTATTTGTTTAGTCTGTGCCGTAAGGTGACCAGTATCATTGATTCGGGTTCCTCAGTAACTCTGAATTGGGATACACCGTTGATTCAGGCACCTGTGGCGGGTGACACTGTAGTTGTGTTCAACCGAGTCCCGAAATCTATAACAGCGGGCCCGGGCATCACCATCACGCGGGGGGCTAATGGTCAGATGGTGATATCTGCCGCTCAGGGCAGTGTGAGTGTGTGGCGCAACGGTATAGGGGCACCTGCCAACACAGTAGGAAATAATGGGGATTACTATCTAGATGACGGTAACGGAAACGTGTACGCGAAGTCGGCCGGAGTCTATTCGATAGTCGCTAACATAGCAGGTCCCCAAGGCGTCGCTGGAGCCGCAGGTGCCGCGGGCGCTACGGGTCCGCAAGGTCCTAAAGGTGATGCTGGTATAGCGGGTGCGCCGGGCGCGAATGGCAACACTATATGGAACGGGACTGGTGCTCCGTCAAACACACTCGGCGCACCCGGCGACTTCTATTTGCAGACCGATACTTCGGTGCTATGGGGTCCTAAAACAACGGCATGGCCATCGTCTGGTGTACCGCTACAGGCACCAATGAAGACGTACGCAGTGTCGCTATTTGTTGAAGGCACAACAAACGTGCCCAATGAAGTTCTTATGGTGCACTGTGCAGCTGCCGCATTCACTATACCTGTAAGCCTTCCGGGTTCTAATGTCAAGGCCCTGAGTCCAGCTGCCAATAACTCGGTGTTCATCATCAAGAAGAACGGGACTCAGATAGGGGTAGCCACATTTGCCATTGGGTCTACTACTGCACTTCTTGGATCATCGGTTCCGGTGTCCTTTGCCGTGGGTGATATTCTAGAAGTGGACGGGCCAAACACACCCGACCCCTCGCTAGCTAACATCGGATTCACCATTGTGGGTACGCTGAATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bfe36e4d12619d4b30916cb9570c8dbb1329a1822cf12f33df1da349b67bf63e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8496
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50