Protein

View in Explore
Genbank accession
YP_010664921.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MLLTIHDANLQKVAFIDNEKQGTLNYYDDTWTRSLATGSSTFEFTVFKKAVKSDLPLAKAYHHLNEHAFVSFKYKGKSFVFNIIIVEENEQTIKCYCENLNLELINELANPYKSNKAMTFKEYCEAMDLLNYTHLSIGINEISDYKRTLEWEGQETKLARLLSLAKRFDAEIEFDTQLNADSTIKKFSVNVYHENDDNHQGVGRVRNDVIVKYGKNIHSITRKVDKTGIFNTIRPTGKMPTVEEEPSGDKGSKSETVKNADGSTTKTTISTASDGTKSKTIVHTKVTKLADKTRITTTTTTRSDGSIEQTVTTSKKGGASTSETKVLKKPNPKEKTNTTEDVLTIEGLDEWEVKNEKGIVEFYQRGQALYAPISMQLYPSTFTHSTGELDQWTRKDFHFETDEPNELRRLGYLKLKKYCYPAITYEVDGFVDADIGDTVKVHDDGFAPLLMIQARVTDQKISFTNPVRNKTIFDNFKALENKLSADIQSAFERLFEAAKPYTIKLSTDNGVIFKNQIGQSLVTPTLYKGGKPVVVGVTWRWALDGEVTTGMTYLVRGSNVTDTVTLTVAAYIGNKEVAVDEISLVNVADGKLGTPGTPGRDGRTPYVHTAWANNATGTDGFSLDSSINKLYIGIYTDFEPNDSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLDGLQGARGEQGLPGRNGADGRTQYTHIAYSNSADGTKDFSVSASDRAYIGMYVDFNSADSNTPSDYNWTLVKGSDGANGVAGKAGADGRTSYFHIAYAASADGSREFSLEDNRQQYMGYYSDFTAADSRDRTKYKWFDRLANVQVGSQNLLRNTATLPIKNGLDGTWRSTSGGNGVAEPVTLDKYPVPGILKGVRVKNNTNGGNKDLSQIINLVIGQRYTISCWARVSSTSDRSTVNLLVRSWTVNDTNRILFKAISNKTWVKYSLSFTADAEKNSIQFGQNGPGNIEICGMKLELGNVATDWSLSVEDIQSQLDGKADQKLTQQQLTALTEKAQLHDAELKAKATMEQLSDLEKAYNAFVKSNADSRKKSESDLVEAGRRIDLLTTQFGGLAELKTFIDTYMKSTNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVINIDNGIFTASIQIGRFRTEQYHLNKDVNVIRYIGG
Physico‐chemical
properties
protein length:1152 AA
molecular weight: 127594,24360 Da
isoelectric point:6,82383
aromaticity:0,08854
hydropathy:-0,54106

Domains

Domains [InterPro]
DC_0255
STR
1–1152
DC_0255
PTHR24637
Unmapped
589–760
PTHR24637 G3DSA:2.60.120.260 Coil
IPR008160
STR
656–692
IPR008160 IPR008979
YP_010664921.1
1 1152
Architecture
STR
STR 1-1152
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage SpGS-1
[NCBI] 		1897555 Uroviricota > Caudoviricetes > Paclarkvirus >
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010664921.1 [NCBI]
Genbank nucleotide accession
NC_070927 [NCBI]
CDS location
range 29947 -> 33405
strand +
CDS
ATGCTTTTGACAATCCATGATGCAAATTTACAAAAGGTAGCATTTATTGATAACGAAAAACAAGGTACGTTAAATTATTACGATGATACTTGGACAAGAAGTCTTGCAACAGGTTCGTCAACGTTTGAGTTTACGGTATTTAAAAAGGCTGTAAAGTCTGATTTACCTCTTGCTAAAGCCTATCATCATTTGAATGAGCATGCATTTGTCTCATTTAAGTACAAGGGTAAAAGCTTTGTGTTTAATATCATTATTGTTGAAGAAAATGAGCAGACAATCAAATGTTATTGTGAAAATCTCAATCTTGAGTTAATCAATGAGCTTGCGAACCCTTATAAATCTAACAAAGCGATGACTTTCAAAGAGTATTGTGAGGCGATGGATCTTTTAAATTATACTCACCTTTCTATTGGTATCAATGAAATATCAGATTATAAGCGTACTCTGGAATGGGAGGGGCAAGAAACCAAACTAGCCCGTCTATTAAGCCTAGCCAAACGATTTGATGCTGAGATTGAATTTGATACACAGTTAAATGCTGATAGCACTATCAAAAAGTTTAGTGTTAATGTTTATCATGAAAACGATGACAACCATCAAGGGGTGGGACGTGTAAGAAATGATGTCATTGTTAAATACGGAAAAAACATCCACTCTATTACAAGAAAAGTGGATAAGACTGGTATTTTCAATACAATCAGACCGACTGGTAAAATGCCAACGGTTGAAGAAGAACCGAGCGGAGATAAGGGCTCCAAAAGCGAAACTGTAAAAAATGCAGATGGTTCAACGACGAAAACCACAATCTCTACAGCCTCAGATGGGACTAAGAGCAAAACTATTGTCCACACTAAAGTTACAAAGTTAGCGGACAAGACACGGATCACAACGACCACAACGACTCGTTCTGATGGTTCCATAGAACAAACTGTTACAACCAGCAAAAAAGGCGGAGCATCAACGTCTGAAACAAAAGTCTTGAAAAAACCAAATCCAAAAGAAAAAACAAATACAACTGAGGATGTTTTGACGATTGAGGGATTGGATGAATGGGAAGTAAAGAACGAGAAAGGGATAGTTGAATTTTATCAAAGAGGGCAAGCACTGTATGCGCCTATTTCAATGCAACTATATCCCTCAACCTTTACTCATTCAACAGGGGAGCTTGACCAGTGGACAAGAAAAGATTTTCATTTTGAAACAGATGAGCCAAACGAGTTAAGACGTTTAGGTTATCTCAAATTGAAAAAGTATTGTTATCCAGCTATCACTTATGAAGTTGATGGCTTTGTCGATGCTGATATTGGAGATACTGTTAAAGTCCATGATGACGGTTTTGCCCCTCTATTGATGATTCAAGCACGGGTTACTGATCAAAAAATCAGTTTCACAAATCCAGTGAGAAATAAGACAATATTTGACAATTTCAAGGCACTTGAAAACAAACTATCAGCTGATATCCAGTCAGCCTTTGAGAGATTGTTTGAAGCTGCTAAACCATATACTATCAAATTGTCAACGGACAATGGTGTTATCTTTAAAAATCAGATCGGCCAGAGTCTAGTAACCCCAACCTTATACAAGGGAGGAAAACCAGTCGTTGTTGGTGTTACTTGGCGATGGGCACTTGATGGAGAAGTAACAACAGGGATGACTTACTTAGTTAGAGGCTCAAATGTAACTGATACAGTTACTCTGACAGTTGCAGCTTACATTGGAAATAAAGAGGTTGCTGTTGATGAGATATCGCTTGTTAATGTTGCTGATGGAAAACTTGGTACACCTGGAACTCCAGGGCGAGATGGCCGTACTCCTTATGTCCATACAGCATGGGCTAATAATGCAACAGGAACAGATGGATTTAGTCTTGATAGCTCAATCAATAAACTCTATATTGGTATTTATACAGACTTTGAACCAAACGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAGGGAGAAAAAGGAGATAAAGGAGAACCGGGACAACGTGGTTTAGATGGCTTGCAAGGTGCAAGAGGTGAACAAGGATTACCTGGTCGCAATGGTGCAGATGGCCGTACTCAATACACTCACATAGCCTACAGCAATAGCGCTGATGGAACTAAGGATTTTTCTGTAAGCGCCTCTGATAGAGCTTATATCGGTATGTATGTTGATTTTAATAGCGCTGATAGCAATACTCCATCTGATTACAATTGGACACTTGTAAAAGGCTCTGATGGCGCAAATGGCGTGGCAGGTAAGGCTGGTGCAGATGGTAGGACATCCTATTTCCATATAGCATACGCAGCAAGTGCAGACGGATCACGCGAATTTAGTTTAGAGGATAATCGCCAGCAATATATGGGCTATTATTCCGATTTTACCGCAGCAGATAGTAGAGATCGAACTAAGTATAAATGGTTTGACCGACTAGCTAATGTTCAAGTGGGTTCCCAGAACTTGCTTAGAAATACTGCAACTCTTCCTATTAAGAATGGATTAGACGGTACCTGGCGGAGTACGTCAGGTGGTAACGGAGTAGCGGAACCTGTTACCTTGGATAAATATCCTGTACCTGGAATCCTAAAAGGTGTTCGAGTTAAAAACAACACCAACGGGGGTAATAAGGACCTTAGCCAGATTATTAACTTAGTTATAGGTCAACGTTATACAATATCCTGCTGGGCTCGTGTAAGCTCTACAAGTGATCGATCTACTGTGAACCTACTAGTAAGGTCCTGGACAGTGAACGATACTAATAGGATACTTTTTAAGGCTATAAGTAATAAGACTTGGGTTAAGTACAGTCTTTCCTTCACTGCGGACGCTGAGAAAAATTCAATTCAGTTCGGTCAAAACGGACCAGGTAATATTGAAATCTGTGGAATGAAATTAGAACTCGGTAATGTAGCCACTGATTGGTCCTTATCCGTAGAAGACATTCAATCTCAGTTAGACGGAAAAGCTGACCAAAAGCTAACTCAACAACAATTGACGGCCCTAACTGAAAAGGCTCAGTTACACGACGCAGAGTTGAAAGCTAAGGCTACGATGGAACAATTAAGTGATTTAGAAAAAGCATATAATGCCTTTGTGAAATCAAATGCAGATAGTCGAAAAAAATCTGAGTCTGATTTAGTTGAAGCAGGTAGAAGAATTGATTTGCTGACGACACAATTTGGAGGATTAGCAGAGCTTAAAACATTCATTGATACTTACATGAAAAGCACAAATGAGGGCTTGATTATAGGTAAGAATGATGCAAGCTCTACTATTAAGGTATCAAGTGATAGAATATCCATGTTTTCTGCAGGTAAGGAAGTTATGTACATTTCGCAAGGTGTAATAAATATTGATAATGGTATTTTTACTGCATCAATTCAAATTGGACGTTTTAGAACAGAACAGTATCATCTTAACAAAGATGTGAATGTCATACGATATATAGGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ec0e073a7d128a5abf6e51b7d80d7cd366e510956ca931abcaf61b984a3cee7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7749
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploration of the diversity of Streptococcus pneumoniae bacteriophages in The Gambia Rangel Pineros,G.A., Millard,A., Kwambana,B.A. and Clokie,M. 2016-06-20 — GenBank