Protein

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Genbank accession
YP_010088693.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPTSRVSGNQIENTTNVTINGLSFASQTAVLKLPVGNGTTQRPQNPVIGLLRFNTDEDRVEQYVNLAQNSQPGWVKVKGGGSSAGLGEYGLIKGNARTIDNNIVIPANTDSPFYSFDFAFTVGPNITVASGTTVTVGEGVDWTIVETGTEPNTLDTGGLASKIGPQWTNIGSSDGLGEYNLIRGNSRSIDQNLTIPFNPSNADYAFENSFSVGPIITVSSGYTLTITNGVTYEILG
Physico‐chemical
properties
protein length:236 AA
molecular weight: 24916,19890 Da
isoelectric point:4,44591
aromaticity:0,08051
hydropathy:-0,20085

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM22
[NCBI] 		1883365 Uroviricota > Caudoviricetes > Pantevenvirales > Alisovirus > Alisovirus socal22
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010088693.1 [NCBI]
Genbank nucleotide accession
NC_055710.1 [NCBI]
CDS location
range 27414 -> 28124
strand +
CDS
ATGCCTACTTCAAGAGTTAGCGGTAATCAAATTGAAAACACTACAAATGTAACTATCAATGGATTATCATTTGCTAGTCAAACTGCGGTGTTAAAACTCCCTGTTGGTAATGGAACTACTCAAAGACCGCAAAATCCTGTTATCGGTCTCTTACGTTTTAATACCGATGAAGACAGAGTAGAACAATATGTAAATCTTGCACAAAATAGTCAACCTGGATGGGTCAAAGTAAAAGGCGGTGGTAGTTCTGCTGGTCTAGGAGAGTACGGTCTTATCAAAGGAAATGCAAGAACTATTGATAATAATATTGTTATTCCAGCAAATACCGATTCTCCTTTTTATTCTTTTGATTTTGCTTTTACAGTCGGACCAAATATTACAGTTGCAAGTGGTACAACTGTAACGGTTGGTGAGGGTGTAGATTGGACTATTGTTGAAACAGGTACAGAACCAAATACTTTAGATACTGGTGGTCTTGCATCTAAGATTGGACCACAATGGACAAACATTGGATCTAGTGATGGACTTGGAGAATATAATTTAATCCGTGGAAATTCAAGATCGATCGATCAAAACTTAACTATTCCTTTTAATCCATCTAATGCGGATTATGCTTTTGAAAACTCTTTTTCTGTAGGACCAATTATTACAGTTAGTAGTGGTTATACACTTACGATTACTAACGGGGTCACCTACGAAATATTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2c92138577da2b70e651348b4decd950ef0423a37cd06d979344e7f5d537dd67
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7269
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50