Protein

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Genbank accession
URQ03711.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIEVNIDDLLKNGKVTFEFEKADGSIKTVTGTRNLDFIPAEFHPKEKPLSEGETKPEKTEKQKATCGYFDLEANGWRSFKRANLREVKSFD
Physico‐chemical
properties
protein length:91 AA
molecular weight: 10411,61880 Da
isoelectric point:5,88593
aromaticity:0,09890
hydropathy:-0,84615

Domains

Domains [InterPro]
IPR024401
STR
6–84
IPR024401
URQ03711.1
1 91
Architecture
STR
STR 6-84 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage PVA23
[NCBI] 		2938950 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ03711.1 [NCBI]
Genbank nucleotide accession
ON190025.1 [NCBI]
CDS location
range 222353 -> 222628
strand +
CDS
ATGATTGAAGTGAATATCGACGACTTGCTGAAAAATGGTAAAGTCACATTTGAATTTGAGAAAGCAGATGGTTCTATTAAGACTGTAACTGGTACGCGCAATCTCGATTTCATCCCTGCTGAGTTTCACCCGAAAGAAAAGCCTTTATCTGAAGGTGAGACAAAGCCAGAGAAAACAGAAAAGCAAAAAGCGACATGCGGTTACTTCGATCTCGAAGCTAATGGCTGGCGTTCGTTTAAACGAGCTAATTTACGCGAAGTGAAATCGTTTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a948da2837196008fac98c4568395506fd819e0022cb4528c80849d3ccc572ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8928
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a bacteriophage and its application for the inhibition of Vibrio alginolyticus in shrimp farming He,Z. 2024 — GenBank