Protein

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Genbank accession
AYD82492.1 [GenBank]
Protein name
host specificity factor TipJ family tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MATLLLIENAFRPDANPRQEPVRAGERISSMLRRIGYLKGRGAKAVRKVPFIVVRNGEPVLIAQMSTRIKAKDHISVIHLPKGGGGGSNPLQMVLTVAIAVAAAYTGGLAATAFGSQLAGAAVSAAVMIGGTLLLNMFFPPQMPSAMSLNREKASPTYSISSQGNQARLMEAIPVLYGRFRTFPDLASAPYTESRGNETYLYQLFCITQGQMDIETIQVENDNVSTYGEIEYQIVNPGQSVTLFPDNVISSPAVNNFELTPPEQPGNIKGPFAVSNPGVQVNYIGIDLYLPGGAYYMNDKGRFETSRVNVQFEYQAINDAGVPSGNWMPLFSKEYAFATNTPQSISEKIEVPLGRYQVRGYRTTAGPADNREINVIQWAVMRGYAPSVRQYGDVTLLAMIIKATNNINQQTARRVNVIGTRKLPVWDPVNGWSVNPVATTNPAWAAADILRNTTYGRRLPTSRINIQELYRLSQVYQTRGDEFNGVFDTTSQLWDALTKVLRVGRTVPINYAGLIDFVRNEPKTVPTYMFQPQNMVENSFSTEYAFAEPGSTPNYVQVEYINRETWVSETVDCVLPGVAPTIPAKVQLMGVTSRAQAWREGMSLAAANRDQRRQISFSTGFEGYLPRFGDLVQISHDVPQWGYSGEVLGLNAGPDSEEYGLQGELTTTEELVFVPGLTHQIAFKKRDGSPHGPFNVVPHPSGLYNKAVVQATVAQLQQIYISDGFREELTQYQFGPTERRGLRAIALSATPDSDGKVLLTFTNYAESVHAAENGGVTPPPGPDSNLPGIVTVPVIDSVKLELTPYAWQQLIVATPARGARLYEYEISQDGLNWSNLGTATSPSMQVNLSGGTWFVRVRAIGNLTGPWTTWTGVVEASTLPASRVDHVSITSVVFGIDLEWAVREDDYLAASVEVYWGTTNVLGNATRLIDMPLPGNKFSVTDLGPGAVRYFWFRAIDEAGRVGPWYNNGVGLMGKSSDQADIIMAYLDGKITETQLAQSLIEKIDSGGGAAVEVEAIQNALAAMYTIKTQLTAGGRTALAGIGVGVENNDGVLESQVLVLADRFAVGRSDDATGTFKSMFIIDNGNVYIDTAFIKNGTITNAMIGNVLQSNNYVPGVSGWRIDKATNTIEINSPLPGGGRLTIDSQAVVVYDPNGIDRARFGWIP
Physico‐chemical
properties
protein length:1165 AA
molecular weight: 126760,81630 Da
isoelectric point:5,41070
aromaticity:0,09099
hydropathy:-0,14318

Domains

Domains [InterPro]
DC_0129
STR
1–1114
DC_0129 DC_2243
NF040662
Unmapped
279–770
NF040662 IPR015406
IPR055385
ATT
280–382
IPR055385 IPR032876 IPR053171
AYD82492.1
1 1165
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-279 | ATT 280-382 | STR 383-492 | ATT 493-641 | STR 642-1114 | RBD 1115-1164 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYD82492.1
1 1165
Domain Start End Length (AA) Confidence
N-terminal 1 646 646 0,8347
Central domain 647 1114 469 0,0454
C-terminal 1115 1165 50 0,4948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-646
Central
647-1114
C-terminal
1115-1165

Taxonomy

  Name Taxonomy ID Lineage
Phage Achromobacter phage vB_AdeS_ART
[NCBI] 		3452123 No lineage information
Host Achromobacter denitrificans
[NCBI] 		32002 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYD82492.1 [NCBI]
Genbank nucleotide accession
MH746817 [NCBI]
CDS location
range 20477 -> 23974
strand -
CDS
ATGGCAACCCTGCTGCTGATTGAAAACGCTTTTCGCCCAGACGCGAATCCCCGGCAAGAGCCGGTCCGCGCCGGCGAGCGTATCAGCTCCATGCTGCGCCGTATCGGCTACCTGAAGGGCCGCGGTGCGAAAGCGGTGCGTAAAGTCCCGTTCATCGTCGTTCGAAACGGCGAACCGGTCCTTATTGCCCAAATGTCTACGCGCATTAAGGCTAAGGACCATATCAGCGTCATTCACCTGCCAAAGGGCGGTGGTGGCGGGAGCAACCCGCTTCAAATGGTGTTGACGGTGGCTATTGCTGTCGCAGCCGCCTATACTGGCGGTTTGGCTGCTACGGCTTTTGGCTCCCAACTGGCCGGCGCGGCAGTGTCGGCTGCGGTCATGATTGGCGGCACTTTGCTGCTGAACATGTTCTTCCCGCCGCAAATGCCGTCAGCCATGTCCTTGAATCGAGAGAAGGCGAGCCCAACGTACTCGATTTCCTCTCAAGGCAACCAGGCCCGGCTTATGGAAGCTATCCCGGTCCTGTACGGTCGCTTCCGCACTTTCCCTGACCTCGCTTCGGCTCCCTATACCGAGTCGCGAGGCAACGAGACTTACCTGTACCAGCTCTTCTGCATCACGCAAGGGCAAATGGACATCGAGACCATCCAGGTCGAGAACGACAATGTGTCCACGTACGGGGAAATCGAGTACCAGATTGTCAATCCTGGGCAGTCTGTTACCCTGTTCCCGGACAACGTCATTTCCAGCCCAGCCGTCAACAACTTTGAGCTGACGCCGCCGGAGCAGCCTGGCAATATCAAGGGGCCTTTTGCCGTCTCGAACCCTGGCGTACAAGTCAACTACATCGGCATTGACCTGTACCTGCCGGGCGGTGCCTATTACATGAACGACAAGGGGCGGTTTGAAACCTCCCGCGTCAACGTGCAATTTGAATACCAAGCCATCAATGACGCGGGCGTTCCGTCCGGCAACTGGATGCCTTTGTTCAGCAAGGAATATGCTTTTGCAACCAATACCCCGCAGAGCATCTCCGAGAAGATCGAGGTTCCGCTCGGCCGTTATCAAGTACGTGGCTACCGTACCACTGCTGGTCCCGCGGATAACCGTGAAATCAACGTGATCCAGTGGGCTGTCATGCGGGGCTATGCTCCGTCGGTCCGCCAGTATGGTGACGTGACTTTGCTGGCTATGATTATCAAGGCCACGAACAACATCAACCAGCAAACTGCTCGCCGCGTCAATGTGATTGGCACGCGTAAGCTGCCAGTATGGGACCCAGTTAATGGTTGGTCTGTCAACCCTGTTGCTACGACCAATCCAGCTTGGGCTGCTGCAGATATCCTGCGCAATACTACCTATGGCCGGCGCCTGCCAACTTCCCGCATCAACATTCAAGAGCTGTACCGCCTTTCGCAGGTCTATCAGACACGCGGTGACGAGTTCAATGGCGTCTTTGATACTACTTCTCAGCTGTGGGACGCGCTGACGAAAGTCTTGCGGGTGGGTCGGACTGTTCCGATCAACTACGCGGGCCTCATTGACTTTGTGCGCAACGAGCCCAAGACGGTTCCAACCTACATGTTCCAGCCTCAGAATATGGTGGAGAACTCGTTCAGCACTGAATACGCCTTTGCGGAACCGGGCTCTACTCCGAACTATGTTCAAGTTGAGTATATCAACCGTGAAACTTGGGTGTCTGAGACTGTCGACTGCGTGCTCCCGGGCGTCGCGCCTACGATTCCGGCAAAGGTGCAGCTCATGGGCGTCACTAGCCGCGCTCAAGCATGGCGCGAAGGCATGTCCTTGGCCGCCGCCAACCGCGACCAACGCCGTCAAATCAGCTTCTCGACAGGCTTTGAGGGCTATTTGCCTCGCTTCGGCGACCTCGTCCAGATTTCTCACGACGTTCCTCAATGGGGGTACTCTGGTGAAGTCTTGGGCTTGAACGCCGGACCGGACAGCGAAGAGTATGGCCTGCAGGGTGAACTGACCACCACGGAAGAGCTGGTATTTGTTCCCGGACTGACCCACCAAATCGCGTTCAAGAAGCGCGATGGATCGCCGCATGGCCCCTTCAACGTTGTACCGCACCCCTCTGGTCTGTACAACAAGGCCGTCGTCCAAGCCACTGTCGCCCAGCTGCAGCAAATCTACATTTCGGACGGTTTTCGGGAGGAGCTGACGCAGTATCAATTCGGTCCTACCGAACGCCGTGGGCTGCGCGCAATCGCGTTGTCGGCTACTCCGGACAGTGACGGAAAAGTGCTGCTGACGTTCACGAACTACGCAGAAAGTGTCCATGCTGCTGAAAACGGGGGTGTTACTCCTCCTCCTGGCCCAGACTCGAATCTCCCGGGTATCGTCACGGTGCCCGTCATCGATTCGGTCAAGCTGGAGCTGACCCCGTACGCTTGGCAGCAGCTGATCGTGGCTACGCCTGCCCGTGGCGCTCGCTTGTATGAGTATGAGATTAGCCAGGACGGCCTCAATTGGTCCAACCTCGGTACGGCTACGTCTCCTTCGATGCAAGTCAACCTCAGTGGCGGCACCTGGTTTGTCCGAGTGCGTGCTATCGGCAACCTGACTGGCCCTTGGACTACTTGGACGGGCGTCGTTGAGGCGTCTACGCTTCCAGCTTCCCGCGTCGACCACGTTTCCATTACGTCGGTTGTGTTTGGTATCGACCTCGAATGGGCCGTGCGTGAAGATGACTATCTGGCTGCGTCCGTTGAGGTGTACTGGGGAACTACCAACGTGCTCGGCAATGCCACCAGGCTCATTGACATGCCACTGCCAGGGAATAAATTCTCTGTCACGGACCTCGGGCCTGGTGCTGTTCGGTACTTCTGGTTCCGAGCGATTGACGAAGCAGGGCGCGTCGGTCCTTGGTACAACAACGGCGTGGGTCTGATGGGCAAGTCCAGCGATCAAGCTGACATTATCATGGCCTATCTGGACGGCAAGATCACTGAGACCCAACTGGCTCAATCCCTTATCGAGAAGATCGATTCTGGTGGCGGAGCTGCAGTCGAGGTGGAGGCAATCCAAAACGCCTTGGCCGCAATGTATACCATCAAAACGCAGTTGACGGCTGGTGGCCGCACAGCTCTTGCTGGTATCGGTGTTGGTGTCGAAAACAACGACGGTGTGCTAGAATCACAAGTACTTGTGTTGGCAGACCGATTTGCGGTGGGTCGTTCTGATGATGCTACTGGTACTTTCAAGTCCATGTTCATCATCGACAACGGCAACGTGTATATCGACACTGCCTTCATCAAGAACGGCACCATTACGAACGCAATGATTGGAAATGTGCTTCAATCCAATAACTACGTTCCCGGTGTTTCTGGCTGGCGCATTGATAAAGCCACCAACACCATTGAAATTAACAGCCCGCTGCCCGGAGGCGGACGTCTTACTATCGACTCTCAAGCGGTAGTTGTGTATGACCCCAATGGGATTGACCGGGCACGCTTTGGATGGATTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
47e4351f83a6ad2ff399eded347fd2eb18e172dd4a90f1dd473566995cac0e92
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2704
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50