Protein

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Genbank accession
UVX30498.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MIKNDFNQPKGSTIGVLKDGRTIQQAIDQLGYLPKFTGVYDIIITYGQSNSAGEAILSGSTAGFPQPLPASLMYDFTDGTIKPIIQNIVSANGVASSGHAWGEFANEWYRLSGRGSVVVHCGRGAQTIQALSKGQSNNYYSRMVDGVAAAKARMAAQGLTVGKVYFMFHQGESDMSSFTTFDTYRGLMIQLNDDVVADMGVDLFCNFTVGCPANRQEYTWATIQNAQRYCTRGRDNMVTVFDGCPSFLLRDGNIGTEGVHYTQRGYNLMGREGARGLWSKESSGITSKTVPDLEMYSKSVAPWAAAQDVNASIRWAGSTNSWALLQRSNDIGRWHPSNINGIRTATDGNSLEFIVADKASNWFNVRASVNRGLVAQGFKATAEIITMDLDYIVKAVVYCDVEFIVNTVTGEIRAMRTSATPGWLGRNITATVIAPGVVNITHGQSSGYAQATYYGSTDGTLTAATVSVNCPDSATTRVNCSVTVNDQNPWVAVRIPNVLIKPDTLYDADATIQISGTYAPEF
Physico‐chemical
properties
protein length:522 AA
molecular weight: 56504,78670 Da
isoelectric point:6,10732
aromaticity:0,09579
hydropathy:-0,15364

Domains

Domains [InterPro]
DC_1550
ATT
2–35
DC_1550 SSF52266 DC_1094
IPR036514
STR
41–297
IPR036514
IPR005181
ENZ
41–271
IPR005181
IPR036514
STR
41–285
IPR036514
UVX30498.1
1 522
Architecture
ATT
STR
RBD
ATT 2-35 | STR 39-297 | RBD 298-522
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UVX30498.1
1 522
Domain Start End Length (AA) Confidence
N-terminal 1 250 250 0,1608
Central domain 251 449 200 0,3373
C-terminal 450 522 72 0,9923
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-250
Central
251-449
C-terminal
450-522

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage VLCpiA3b
[NCBI] 		2874873 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UVX30498.1 [NCBI]
Genbank nucleotide accession
ON602742.1 [NCBI]
CDS location
range 22104 -> 23672
strand +
CDS
ATGATAAAGAACGATTTTAACCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAACAGGCCATTGACCAGCTCGGATATCTACCCAAGTTCACAGGGGTGTACGACATTATCATAACCTATGGCCAGTCCAACAGTGCTGGTGAGGCAATCCTCTCAGGTTCTACCGCTGGGTTCCCTCAGCCGCTGCCAGCGTCCCTGATGTACGACTTCACGGATGGCACCATTAAGCCTATCATCCAGAACATCGTTAGTGCGAACGGTGTGGCTTCGTCAGGGCACGCTTGGGGCGAGTTTGCGAACGAGTGGTACAGACTATCGGGGAGAGGGTCGGTAGTGGTCCACTGTGGGCGAGGTGCTCAGACCATCCAAGCCCTGAGTAAGGGACAGAGTAACAACTACTACTCTCGCATGGTTGATGGAGTCGCGGCGGCTAAGGCTCGTATGGCTGCTCAAGGCCTGACTGTTGGTAAGGTGTACTTCATGTTCCACCAAGGCGAGTCTGATATGAGTTCATTCACCACGTTCGATACGTATCGTGGGTTGATGATTCAGCTCAATGATGACGTGGTTGCTGATATGGGTGTCGACCTTTTCTGTAACTTCACAGTAGGATGTCCAGCCAACCGTCAGGAATACACGTGGGCCACAATTCAGAACGCCCAGCGGTACTGTACACGCGGTCGTGACAACATGGTTACCGTATTCGATGGGTGCCCTTCATTCCTGCTCCGCGATGGTAACATCGGGACAGAGGGTGTCCACTATACCCAGCGAGGGTATAACCTGATGGGCCGTGAGGGCGCGCGTGGGCTGTGGTCTAAGGAATCAAGCGGCATTACCTCCAAGACTGTCCCAGACCTTGAGATGTACAGTAAGTCTGTGGCTCCGTGGGCGGCTGCTCAGGACGTAAATGCTTCAATCCGTTGGGCTGGCTCCACTAACTCATGGGCTTTATTGCAGCGCTCTAACGACATTGGCCGCTGGCACCCGTCTAACATTAACGGAATACGAACAGCAACCGATGGTAACTCGCTTGAGTTCATTGTTGCGGACAAAGCGTCTAACTGGTTCAACGTGCGGGCGTCGGTAAACCGTGGACTTGTTGCGCAGGGGTTCAAGGCAACCGCTGAGATTATCACAATGGACCTTGACTACATCGTTAAGGCGGTGGTGTACTGTGACGTCGAGTTCATCGTAAACACAGTTACAGGCGAGATTCGGGCCATGCGTACCAGCGCTACTCCGGGCTGGCTTGGCAGAAACATCACAGCGACTGTGATAGCACCGGGAGTGGTGAACATCACCCACGGACAGTCTTCTGGGTATGCTCAGGCAACCTACTACGGGTCCACCGATGGTACACTGACAGCTGCCACTGTGTCGGTGAACTGCCCAGACTCAGCAACCACCCGCGTTAACTGTAGCGTTACGGTGAATGACCAGAACCCTTGGGTGGCTGTGCGAATCCCTAACGTCCTCATCAAGCCGGACACTCTGTACGATGCCGATGCGACCATTCAGATTAGTGGTACATACGCTCCAGAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61dab2a610ae8e54166fcf4a951ad928eeab15910283a894bbb217f5e78ccdfd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic determinants of host tropism in Klebsiella phages Beamud,B., Garcia-Gonzalez,N., Gomez-Ortega,M., Gonzalez-Candelas,F., Domingo-Calap,P. and Sanjuan,R. — — GenBank