Protein

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Genbank accession
YP_008240636.1 [GenBank]
Protein name
virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEYFVDGNITSSGDGLTELNAFKTIQEGIDAAYPGDIVYIKAFTYASSINTTERAGTLANPIKFIGYLNTPGDIVSIDGPTYTKAMYDTDNYVLGDEDMPLLQMDRGSDDAPENTDRAFYIEHSYIHLENIKIQYYQIGVDITNGTIVGIEIKNIICNEMGSWDQTDPGWNQGAVGGAFLSGQGIYSVGMNDSAILNCAVYDAGAASYFIVNADNILLEGCEAYTTRGGNASDYQFDFATVTNSTLRNYIAYREIASSTMHQGRAVMIQLQSNNNLIENGVHTNLRTQIEVQSSNNTLRNIRVIGSGVANQGEIQISGESNNNIFYNWKFTDSNAIQFLGASDTRQPGVSHVYSGNNNYFINFIVKDVPTGLGNAVISYHRLGFSDPDDGGTNYIVNMTADNAPHIVNTNRTGTLHIYNSSFSNIGDYDTWSYSGTATDQPVDLYYYNCNFYNNGFATPTNNTERTLVNTTALNPMFNSDYTLQEASPLRDIGMDASTVHALAATDYIGNARPQNGSYDIGAYEYSTATGIPNTDGTGTVDDTAALQTWLDSGSTTKPLGNEIYLVSGTLDINQSGAQEVDFNGATIIVSSYADRYAIDIDKPDRSLTTLKNLTIDGKDLQRNGVRVDSPIYAENVNLLDFYSPTQSIVGWLLNINLTNYGDFTWNNCDVTKMYSEYNSIIGDGLGSARAYDIQVNAMPPDTFTVLIEDFVWDGFYGDDGGPIRVDDNTSENMSVTNNSVTLRNGSVTAFTRRGIKMAMDNITIDNVFYKSITTSNPYYQYAEPAGLIGARPLDTDPNGLLDNIVIKNCTFDGSGNYPWALIDKANTKWSNNTFINGAGIRIGNNSNSEVGDVVICGSNFGTGSKIHQQLDTVSNAPGTNIIIDSNNIADANYLEFTTLSYTVQEVLDCLGNVIIPIPLLANRNQNLIYWRI
Physico‐chemical
properties
protein length:932 AA
molecular weight: 101957,01240 Da
isoelectric point:4,25675
aromaticity:0,10300
hydropathy:-0,29818

Domains

Domains [InterPro]
IPR012334
STR
1–281
IPR012334 IPR006626 IPR059226 IPR011050
IPR011050
STR
2–333
IPR011050 IPR012334
IPR006626
Unmapped
123–144
IPR006626 IPR006626 IPR011050 IPR006626 IPR006626
IPR000601
ENZ
319–367
IPR000601
YP_008240636.1
1 932
Architecture
STR
STR
STR 1-525 | STR 532-915 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008240636.1
1 932
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,8951
Central domain 16 482 468 0,9918
C-terminal 483 932 449 0,0364
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-482
C-terminal
483-932

Taxonomy

  Name Taxonomy ID Lineage
Phage Cellulophaga phage phi4:1
[NCBI] 		1328029 Uroviricota > Caudoviricetes > Lightbulbvirus >
Host Cellulophaga baltica
[NCBI] 		76594 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota
Host Cellulophaga baltica 4
[NCBI] 		1348582 Bacteria > Bacteroidetes > Flavobacteriia > Flavobacteriales > Flavobacteriaceae > Cellulophaga

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008240636.1 [NCBI]
Genbank nucleotide accession
NC_021788 [NCBI]
CDS location
range 54808 -> 57606
strand -
CDS
ATGGAATACTTTGTAGATGGAAATATTACTTCTTCTGGGGATGGTCTAACAGAACTTAACGCATTTAAAACTATCCAAGAAGGAATTGATGCAGCATACCCAGGTGATATAGTATACATTAAAGCTTTTACTTATGCAAGTTCAATAAACACTACAGAGCGAGCTGGTACCTTAGCTAATCCTATTAAGTTTATAGGTTATCTAAATACACCTGGGGATATAGTTAGTATTGATGGACCTACATACACTAAGGCTATGTATGACACTGACAATTATGTGTTGGGTGATGAAGATATGCCATTGCTACAAATGGATAGAGGCTCAGATGATGCACCTGAAAACACTGATAGAGCTTTTTATATAGAACACTCTTATATACATTTAGAGAATATAAAAATCCAATACTATCAAATAGGTGTAGACATAACAAATGGAACTATAGTAGGTATAGAGATTAAAAACATTATATGTAATGAAATGGGTAGCTGGGATCAAACCGATCCTGGTTGGAATCAAGGAGCGGTAGGAGGTGCATTCTTAAGTGGTCAAGGAATATACTCAGTAGGCATGAATGATTCAGCTATACTTAATTGTGCTGTATACGATGCTGGAGCTGCCTCTTACTTTATAGTTAATGCTGATAACATACTATTAGAAGGTTGTGAAGCTTATACAACTAGAGGTGGTAATGCTAGTGATTACCAATTCGATTTTGCTACAGTAACTAATTCTACTTTAAGAAATTATATTGCTTATAGAGAGATAGCAAGTAGTACAATGCACCAAGGTCGGGCAGTGATGATACAGTTGCAATCTAACAATAACTTAATAGAAAATGGTGTACATACAAATCTAAGAACACAGATAGAAGTACAATCTTCAAATAATACTTTGAGAAATATTAGAGTAATTGGTAGTGGTGTAGCTAATCAAGGTGAAATACAGATTTCAGGTGAAAGTAATAACAACATATTCTACAACTGGAAATTTACTGATTCTAATGCTATACAATTTTTAGGAGCAAGTGATACTAGACAACCAGGAGTTAGTCATGTGTATTCTGGTAATAACAACTACTTTATTAATTTCATAGTTAAAGATGTACCAACTGGATTGGGGAATGCTGTAATATCATACCATAGATTAGGATTTAGTGATCCTGATGATGGAGGTACTAACTATATAGTGAATATGACAGCTGACAACGCTCCTCATATTGTTAATACAAATAGAACTGGTACTTTACATATTTATAACAGTTCATTCTCTAATATAGGTGATTATGATACTTGGAGTTATAGTGGAACAGCTACAGACCAACCAGTAGACTTGTATTATTATAATTGTAACTTTTATAATAATGGTTTTGCAACACCTACCAATAATACAGAAAGAACTCTAGTTAACACTACAGCTTTAAATCCTATGTTTAACTCTGACTACACTTTGCAAGAAGCTAGTCCATTAAGAGATATAGGTATGGATGCCAGTACAGTACATGCTTTAGCTGCTACTGATTATATAGGTAATGCTAGACCTCAAAATGGAAGTTATGATATAGGTGCATATGAGTACTCTACTGCTACAGGAATACCTAATACTGATGGTACTGGTACAGTAGATGATACAGCAGCATTACAAACATGGCTAGATAGCGGTAGTACAACTAAACCTTTAGGTAATGAGATATACTTAGTTTCAGGAACTTTAGATATAAACCAAAGTGGGGCGCAAGAAGTGGATTTTAATGGAGCCACTATAATAGTAAGTTCTTATGCAGATAGGTATGCAATTGATATAGACAAGCCGGATAGAAGTTTAACCACTCTTAAGAACTTAACAATAGACGGGAAAGATCTACAAAGAAATGGTGTTAGAGTTGATTCCCCTATTTATGCAGAAAATGTAAATTTACTAGATTTTTATTCTCCAACTCAAAGTATTGTAGGTTGGTTATTAAATATAAATCTAACTAACTATGGAGACTTTACATGGAATAACTGCGATGTAACTAAAATGTATAGTGAGTATAATTCAATTATAGGAGACGGACTAGGATCTGCTAGAGCTTACGATATTCAAGTTAACGCCATGCCTCCAGATACTTTTACTGTATTAATAGAGGATTTTGTATGGGATGGTTTTTATGGCGATGATGGAGGGCCTATTAGAGTAGACGATAATACAAGCGAGAATATGTCTGTTACAAATAACTCAGTGACATTAAGAAATGGAAGTGTAACAGCTTTTACTAGAAGAGGTATTAAAATGGCAATGGACAATATAACTATTGACAACGTTTTCTATAAATCAATTACAACCTCAAATCCTTATTATCAGTATGCTGAACCAGCTGGCTTAATTGGAGCCAGACCACTTGACACTGACCCAAATGGACTTCTTGATAATATAGTTATTAAAAACTGTACATTTGATGGAAGCGGAAATTATCCTTGGGCTTTAATCGATAAAGCAAATACTAAATGGAGCAACAATACTTTTATAAACGGGGCAGGAATAAGGATTGGAAATAATAGCAACTCAGAAGTTGGTGATGTAGTTATTTGTGGAAGTAATTTTGGAACAGGATCTAAAATACATCAACAATTAGATACAGTTTCTAATGCTCCTGGAACTAACATAATTATAGATAGTAATAACATTGCTGATGCTAATTATTTAGAATTTACAACACTTTCTTATACAGTACAAGAAGTTTTAGATTGCTTAGGTAATGTGATTATTCCGATACCTTTATTGGCAAACAGAAATCAGAATTTAATATACTGGAGAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f752f3833217677712e6bbc925cfb6a8d05ecbb320f64296a25e130668bd1639
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7267
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50